Multivariate phylogenetic comparative methods: evaluations, comparisons, and recommendations

DC Adams, ML Collyer - Systematic biology, 2018 - academic.oup.com
Recent years have seen increased interest in phylogenetic comparative analyses of
multivariate data sets, but to date the varied proposed approaches have not been …

Disparities in the analysis of morphological disparity

T Guillerme, N Cooper, SL Brusatte… - Biology …, 2020 - royalsocietypublishing.org
Analyses of morphological disparity have been used to characterize and investigate the
evolution of variation in the anatomy, function and ecology of organisms since the 1980s …

RRPP: An r package for fitting linear models to high‐dimensional data using residual randomization

ML Collyer, DC Adams - Methods in Ecology and Evolution, 2018 - Wiley Online Library
Residual randomization in permutation procedures (RRPP) is an appropriate means of
generating empirical sampling distributions for ANOVA statistics and linear model …

mvmorph: an r package for fitting multivariate evolutionary models to morphometric data

J Clavel, G Escarguel… - Methods in Ecology and …, 2015 - Wiley Online Library
We present mvmorph, a package of multivariate phylogenetic comparative methods for the r
statistical environment. mvmorph is freely available on the cran package repository …

Rphylopars: fast multivariate phylogenetic comparative methods for missing data and within‐species variation

EW Goolsby, J Bruggeman… - Methods in Ecology and …, 2017 - Wiley Online Library
Over the past several years, phylogenetic comparative studies have increasingly
approached trait evolution in a multivariate context, with a number of taxa that continues to …

Evaluating modularity in morphometric data: challenges with the RV coefficient and a new test measure

DC Adams - Methods in Ecology and Evolution, 2016 - Wiley Online Library
Modularity describes the case where patterns of trait covariation are unevenly dispersed
across traits. Specifically, trait correlations are high and concentrated within subsets of …

Automated syndrome diagnosis by three-dimensional facial imaging

B Hallgrímsson, JD Aponte, DC Katz, JJ Bannister… - Genetics in …, 2020 - nature.com
Purpose Deep phenoty** is an emerging trend in precision medicine for genetic disease.
The shape of the face is affected in 30–40% of known genetic syndromes. Here, we …

Comparing the strength of modular signal, and evaluating alternative modular hypotheses, using covariance ratio effect sizes with morphometric data

DC Adams, ML Collyer - Evolution, 2019 - academic.oup.com
The study of modularity is paramount for understanding trends of phenotypic evolution, and
for determining the extent to which covariation patterns are conserved across taxa and …

Dietary niche and the evolution of cranial morphology in birds

RN Felice, JA Tobias, AL Pigot… - Proceedings of the …, 2019 - royalsocietypublishing.org
Cranial morphology in birds is thought to be shaped by adaptive evolution for foraging
performance. This understanding of ecomorphological evolution is supported by …

Independent origin of large labyrinth size in turtles

SW Evers, WG Joyce, JN Choiniere, GS Ferreira… - Nature …, 2022 - nature.com
The labyrinth of the vertebrate inner ear is a sensory system that governs the perception of
head rotations. Central hypotheses predict that labyrinth shape and size are related to …