Linear ubiquitin code: its writer, erasers, decoders, inhibitors, and implications in disorders

D Oikawa, Y Sato, H Ito, F Tokunaga - International Journal of Molecular …, 2020 - mdpi.com
The linear ubiquitin chain assembly complex (LUBAC) is a ubiquitin ligase composed of the
Heme-oxidized IRP2 ubiquitin ligase-1L (HOIL-1L), HOIL-1L-interacting protein (HOIP), and …

RIP1 post-translational modifications

E Varfolomeev, D Vucic - Biochemical Journal, 2022 - portlandpress.com
Receptor interacting protein 1 (RIP1) kinase is a critical regulator of inflammation and cell
death signaling, and plays a crucial role in maintaining immune responses and proper …

Endothelial FAT1 inhibits angiogenesis by controlling YAP/TAZ protein degradation via E3 ligase MIB2

R Li, J Shao, YJ **, H Kawase, YT Ong… - Nature …, 2023 - nature.com
Activation of endothelial YAP/TAZ signaling is crucial for physiological and pathological
angiogenesis. The mechanisms of endothelial YAP/TAZ regulation are, however …

MALT1-dependent cleavage of CYLD promotes NF-κB signaling and growth of aggressive B-cell receptor-dependent lymphomas

M Minderman, HC Lantermans, LJ Grüneberg… - Blood cancer …, 2023 - nature.com
The paracaspase mucosa-associated lymphoid tissue 1 (MALT1) is a protease and scaffold
protein essential in propagating B-cell receptor (BCR) signaling to NF-κB. The …

25 years of research put RIPK1 in the clinic

L Liu, N Lalaoui - Seminars in Cell & Developmental Biology, 2021 - Elsevier
Abstract Receptor Interacting Protein Kinase 1 (RIPK1) is a key regulator of inflammation. To
warrant cell survival and appropriate immune responses, RIPK1 is post-translationally …

Deubiquitinase CYLD acts as a negative regulator of dopamine neuron survival in Parkinson's disease

SK Pirooznia, H Wang, N Panicker, M Kumar… - Science …, 2022 - science.org
Mutations in PINK1 and parkin highlight the mitochondrial axis of Parkinson's disease (PD)
pathogenesis. PINK1/parkin regulation of the transcriptional repressor PARIS bears direct …

Mechanisms underlying linear ubiquitination and implications in tumorigenesis and drug discovery

J Li, S Liu, S Li - Cell Communication and Signaling, 2023 - Springer
Linear ubiquitination is a distinct type of ubiquitination that involves attaching a head-to-tail
polyubiquitin chain to a substrate protein. Early studies found that linear ubiquitin chains are …

Comprehensive analysis of differentially expressed lncRNA, circRNA and mRNA and their ceRNA networks in mice with severe acute pancreatitis

B Wang, J Wu, Q Huang, X Yuan, Y Yang… - Frontiers in …, 2021 - frontiersin.org
Severe acute pancreatitis (SAP) is an acute digestive system disease with high morbidity
mortality and hospitalization rate worldwide, due to various causes and unknown …

CF-PPiD technology based on cell-free protein array and proximity biotinylation enzyme for in vitro direct interactome analysis

S Sugiyama, K Yamada, M Denda, S Yamanaka… - Scientific Reports, 2022 - nature.com
Protein–protein interaction (PPI) analysis is a key process to understand protein functions.
Recently, we constructed a human protein array (20 K human protein beads array) …

MIND bomb 2 prevents RIPK1 kinase activity-dependent and -independent apoptosis through ubiquitylation of cFLIPL

O Nakabayashi, H Takahashi, K Moriwaki… - Communications …, 2021 - nature.com
Abstract Mind bomb 2 (MIB2) is an E3 ligase involved in Notch signalling and attenuates
TNF-induced apoptosis through ubiquitylation of receptor-interacting protein kinase 1 …