Perspectives and recent progress of genome-wide association studies (GWAS) in fruits

G Zahid, Y Aka Kaçar, D Dönmez, A Küden… - Molecular Biology …, 2022‏ - Springer
Background Earlier next-generation sequencing technologies are being vastly used to
explore, administer, and investigate the gene space with accurate profiling of nucleotide …

Genomic prediction of autotetraploids; influence of relationship matrices, allele dosage, and continuous genoty** calls in phenotype prediction

I de Bem Oliveira, MFR Resende Jr… - G3: Genes …, 2019‏ - academic.oup.com
Estimation of allele dosage, using genomic data, in autopolyploids is challenging and
current methods often result in the misclassification of genotypes. Some progress has been …

Genome-wide approaches for the identification of markers and genes associated with sugarcane yellow leaf virus resistance

RJG Pimenta, AH Aono, RCV Burbano, AE Coutinho… - Scientific Reports, 2021‏ - nature.com
Sugarcane yellow leaf (SCYL), caused by the sugarcane yellow leaf virus (SCYLV) is a
major disease affecting sugarcane, a leading sugar and energy crop. Despite damages …

On the accuracy of genomic prediction models considering multi-trait and allele dosage in Urochloa spp. interspecific tetraploid hybrids

FI Matias, FC Alves, KGX Meireles, SCL Barrios… - Molecular …, 2019‏ - Springer
Currently, there is a lack of information regarding the employment of genomic prediction in
tropical forages when compared to other crops and temperate forages. Moreover, genomic …

Combining high-throughput phenoty** and multivariate analysis to assess fruit quality traits in southern highbush blueberry (Vaccinium corymbosum interspecific …

E Babiker, SJ Stringer, HF Sakhanokho, P Muńoz - HortScience, 2023‏ - journals.ashs.org
Breeding blueberry cultivars with enhanced fruit quality requires simple, accurate, and cost-
effective assays to select individuals from segregating populations. In this study, berry …

The effect of environmental variables on the genoty**-by-environment interaction in blueberry

PM Adunola, LFV Ferrão, CF Azevedo, GH Nunez… - Euphytica, 2024‏ - Springer
Blueberry (Vaccinium corymbosum) has an important role in the global market, with
consumption increasing steadily in the past decades. Adapted to multiple environments, a …

Estimation of molecular pairwise relatedness in autopolyploid crops

RR Amadeu, LAC Lara, P Munoz… - G3: Genes, Genomes …, 2020‏ - academic.oup.com
A suitable pairwise relatedness estimation is key to genetic studies. Several methods are
proposed to compute relatedness in autopolyploids based on molecular data. However …

Tests for segregation distortion in tetraploid F1 populations

D Gerard, M Thakkar, LFV Ferrão - Theoretical and Applied Genetics, 2025‏ - Springer
Genotype data from tetraploid F1 populations are often collected in breeding programs for
map** and genomic selection purposes. A common quality control procedure in these …

Potato population genomics

X Meng, H Tuttle, LM Shannon - Population Genomics: Crop Plants, 2022‏ - Springer
Potatoes are the third most widely grown food crop in the world. Due to their ability to grow
on marginal land and produce large amounts of nutritious food with relatively few inputs …

CRISPR-Cas9-mediated mutagenesis of the flowering repressor gene VcCENTRORADIALIS (VcCEN) induces early flowering in tetraploid highbush blueberry

M Omori, H Yamane, K Osakabe, Y Osakabe, R Tao - 2024‏ - researchsquare.com
Flowering marks the vegetative-to-reproductive growth transition and is the most important
event in the plant life cycle. Unlike annual plants, perennial fruit trees flower and set fruits …