Complex correlations: replication timing and mutational landscapes during cancer and genome evolution
A recent flurry of reports correlates replication timing (RT) with mutation rates during both
evolution and cancer. Specifically, point mutations and copy number losses correlate with …
evolution and cancer. Specifically, point mutations and copy number losses correlate with …
Differential relationship of DNA replication timing to different forms of human mutation and variation
A Koren, P Polak, J Nemesh, JJ Michaelson… - The American Journal of …, 2012 - cell.com
Human genetic variation is distributed nonrandomly across the genome, though the
principles governing its distribution are only partially known. DNA replication creates …
principles governing its distribution are only partially known. DNA replication creates …
Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition
Mutational heterogeneity must be taken into account when reconstructing evolutionary
histories, calibrating molecular clocks, and predicting links between genes and disease …
histories, calibrating molecular clocks, and predicting links between genes and disease …
Perturbations in the replication program contribute to genomic instability in cancer
B Blumenfeld, M Ben-Zimra, I Simon - International journal of molecular …, 2017 - mdpi.com
Cancer and genomic instability are highly impacted by the deoxyribonucleic acid (DNA)
replication program. Inaccuracies in DNA replication lead to the increased acquisition of …
replication program. Inaccuracies in DNA replication lead to the increased acquisition of …
High-resolution replication profiles define the stochastic nature of genome replication initiation and termination
Eukaryotic genome replication is stochastic, and each cell uses a different cohort of
replication origins. We demonstrate that interpreting high-resolution Saccharomyces …
replication origins. We demonstrate that interpreting high-resolution Saccharomyces …
DNA replication and transcription programs respond to the same chromatin cues
Y Lubelsky, JA Prinz, L DeNapoli, Y Li… - Genome …, 2014 - genome.cshlp.org
DNA replication is a dynamic process that occurs in a temporal order along each of the
chromosomes. A consequence of the temporally coordinated activation of replication origins …
chromosomes. A consequence of the temporally coordinated activation of replication origins …
RIF1 regulates early replication timing in murine B cells
The mammalian DNA replication timing (RT) program is crucial for the proper functioning
and integrity of the genome. The best-known mechanism for controlling RT is the …
and integrity of the genome. The best-known mechanism for controlling RT is the …
Chromosomal Mcm2-7 distribution and the genome replication program in species from yeast to humans
The spatio-temporal program of genome replication across eukaryotes is thought to be
driven both by the uneven loading of pre-replication complexes (pre-RCs) across the …
driven both by the uneven loading of pre-replication complexes (pre-RCs) across the …
Replisome stall events have shaped the distribution of replication origins in the genomes of yeasts
During S phase, the entire genome must be precisely duplicated, with no sections of DNA
left unreplicated. Here, we develop a simple mathematical model to describe the probability …
left unreplicated. Here, we develop a simple mathematical model to describe the probability …
Replication stress, genomic instability, and replication timing: A complex relationship
LM Briu, C Maric, JC Cadoret - International journal of molecular sciences, 2021 - mdpi.com
The replication-timing program constitutes a key element of the organization and
coordination of numerous nuclear processes in eukaryotes. This program is established at a …
coordination of numerous nuclear processes in eukaryotes. This program is established at a …