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Function of alternative splicing
Almost all polymerase II transcripts undergo alternative pre-mRNA splicing. Here, we review
the functions of alternative splicing events that have been experimentally determined. The …
the functions of alternative splicing events that have been experimentally determined. The …
The changing paradigm of intron retention: regulation, ramifications and recipes
Intron retention (IR) is a form of alternative splicing that has long been neglected in
mammalian systems although it has been studied for decades in non-mammalian species …
mammalian systems although it has been studied for decades in non-mammalian species …
[HTML][HTML] Genetic drivers of epigenetic and transcriptional variation in human immune cells
Characterizing the multifaceted contribution of genetic and epigenetic factors to disease
phenotypes is a major challenge in human genetics and medicine. We carried out high …
phenotypes is a major challenge in human genetics and medicine. We carried out high …
Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing
Zea mays is an important genetic model for elucidating transcriptional networks.
Uncertainties about the complete structure of mRNA transcripts limit the progress of research …
Uncertainties about the complete structure of mRNA transcripts limit the progress of research …
Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis
Alternative splicing (AS) is a key regulatory mechanism that contributes to transcriptome and
proteome diversity. As very few genome-wide studies analyzing AS in plants are available …
proteome diversity. As very few genome-wide studies analyzing AS in plants are available …
Chromosome-level reference genome and alternative splicing atlas of moso bamboo (Phyllostachys edulis)
Background Bamboo is one of the most important nontimber forestry products worldwide.
However, a chromosome-level reference genome is lacking, and an evolutionary view of …
However, a chromosome-level reference genome is lacking, and an evolutionary view of …
A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing
Alternative splicing generates multiple transcript and protein isoforms from the same gene
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
Cardiometabolic risk loci share downstream cis-and trans-gene regulation across tissues and diseases
Genome-wide association studies (GWAS) have identified hundreds of cardiometabolic
disease (CMD) risk loci. However, they contribute little to genetic variance, and most …
disease (CMD) risk loci. However, they contribute little to genetic variance, and most …
Analysis of transcriptome and epitranscriptome in plants using PacBio Iso-Seq and nanopore-based direct RNA sequencing
L Zhao, H Zhang, MV Kohnen, KVSK Prasad… - Frontiers in …, 2019 - frontiersin.org
Nanopore sequencing from Oxford Nanopore Technologies (ONT) and Pacific BioSciences
(PacBio) single-molecule real-time (SMRT) long-read isoform sequencing (Iso-Seq) are …
(PacBio) single-molecule real-time (SMRT) long-read isoform sequencing (Iso-Seq) are …
Reviving the transcriptome studies: an insight into the emergence of single-molecule transcriptome sequencing
Advances in transcriptomics have provided an exceptional opportunity to study functional
implications of the genetic variability. Technologies such as RNA-Seq have emerged as …
implications of the genetic variability. Technologies such as RNA-Seq have emerged as …