Genetics of rheumatic fever and rheumatic heart disease

B Muhamed, T Parks, K Sliwa - Nature Reviews Cardiology, 2020 - nature.com
Rheumatic heart disease (RHD) is a complication of group A streptococcal infection that
results from a complex interaction between the genetic make-up of the host, the infection …

AraPheno and the AraGWAS Catalog 2020: a major database update including RNA-Seq and knockout mutation data for Arabidopsis thaliana

M Togninalli, Ü Seren, JA Freudenthal… - Nucleic acids …, 2020 - academic.oup.com
Genome-wide association studies (GWAS) are integral for studying genotype-phenotype
relationships and gaining a deeper understanding of the genetic architecture underlying trait …

Accurate machine learning-based germination detection, prediction and quality assessment of three grain crops

N Genze, R Bharti, M Grieb, SJ Schultheiss, DG Grimm - Plant methods, 2020 - Springer
Background Assessment of seed germination is an essential task for seed researchers to
measure the quality and performance of seeds. Usually, seed assessments are done …

The benefits of permutation-based genome-wide association studies

M John, A Korte, DG Grimm - Journal of Experimental Botany, 2024 - academic.oup.com
Linear mixed models (LMMs) are a commonly used method for genome-wide association
studies (GWAS) that aim to detect associations between genetic markers and phenotypic …

High-dimensional immune profiling identifies a biomarker to monitor dimethyl fumarate response in multiple sclerosis

M Diebold, E Galli, A Kopf… - Proceedings of the …, 2022 - National Acad Sciences
Dimethyl fumarate (DMF) is an immunomodulatory treatment for multiple sclerosis (MS).
Despite its wide clinical use, the mechanisms underlying clinical response are not …

Genome-wide study updates in the International Genetics and Translational Research in Transplantation Network (iGeneTRAiN)

CE Fishman, M Mohebnasab, J Van Setten… - Frontiers in …, 2019 - frontiersin.org
The prevalence of end-stage renal disease (ESRD) and the number of kidney transplants
performed continues to rise every year, straining the procurement of deceased and living …

Integrating genetic analysis of germplasm wealth for enhanced selection and improvement in olive (Olea europaea L.): insights from leaves

W Wu, M Shao, J Qi, G **, R Zhang, Y Yao, C Jiang - Plant Cell Reports, 2024 - Springer
Abstract Key Message High-throughput next-generation sequencing of 161 olive germplas.
33 samples were selected as core olive germplasm and Fingerprints were constructed. After …

Neuroimaging PheWAS (phenome-wide association study): a free cloud-computing platform for big-data, brain-wide imaging association studies

L Zhao, I Batta, W Matloff, C O'Driscoll, S Hobel… - Neuroinformatics, 2021 - Springer
Large-scale, case-control genome-wide association studies (GWASs) have revealed genetic
variations associated with diverse neurological and psychiatric disorders. Recent advances …

Population-aware permutation-based significance thresholds for genome-wide association studies

M John, A Korte, M Todesco… - Bioinformatics …, 2024 - academic.oup.com
Motivation Permutation-based significance thresholds have been shown to be a robust
alternative to classical Bonferroni significance thresholds in genome-wide association …

MultiGWAS: An integrative tool for Genome Wide Association Studies in tetraploid organisms

L Garreta, I Cerón‐Souza, MR Palacio… - Ecology and …, 2021 - Wiley Online Library
The genome‐wide association studies (GWASs) are essential to determine the genetic
bases of either ecological or economic phenotypic variation across individuals within …