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Decoding the tumor microenvironment with spatial technologies
LA Walsh, DF Quail - Nature immunology, 2023 - nature.com
Visualization of the cellular heterogeneity and spatial architecture of the tumor
microenvironment (TME) is becoming increasingly important to understand mechanisms of …
microenvironment (TME) is becoming increasingly important to understand mechanisms of …
Tissue clearing and its applications in neuroscience
State-of-the-art tissue-clearing methods provide subcellular-level optical access to intact
tissues from individual organs and even to some entire mammals. When combined with light …
tissues from individual organs and even to some entire mammals. When combined with light …
[HTML][HTML] A transcriptomic axis predicts state modulation of cortical interneurons
Transcriptomics has revealed that cortical inhibitory neurons exhibit a great diversity of fine
molecular subtypes,,,,–, but it is not known whether these subtypes have correspondingly …
molecular subtypes,,,,–, but it is not known whether these subtypes have correspondingly …
A roadmap for the human developmental cell atlas
Abstract The Human Developmental Cell Atlas (HDCA) initiative, which is part of the Human
Cell Atlas, aims to create a comprehensive reference map of cells during development. This …
Cell Atlas, aims to create a comprehensive reference map of cells during development. This …
Three-dimensional intact-tissue sequencing of single-cell transcriptional states
INTRODUCTION Single-cell RNA sequencing has demonstrated that both stable cell types
and transient cell states can be discovered and defined by transcriptomes. In situ …
and transient cell states can be discovered and defined by transcriptomes. In situ …
Protection of tissue physicochemical properties using polyfunctional crosslinkers
Understanding complex biological systems requires the system-wide characterization of
both molecular and cellular features. Existing methods for spatial map** of biomolecules …
both molecular and cellular features. Existing methods for spatial map** of biomolecules …
Integration of optogenetics with complementary methodologies in systems neuroscience
Modern optogenetics can be tuned to evoke activity that corresponds to naturally occurring
local or global activity in timing, magnitude or individual-cell patterning. This outcome has …
local or global activity in timing, magnitude or individual-cell patterning. This outcome has …
[HTML][HTML] Uncovering an organ's molecular architecture at single-cell resolution by spatially resolved transcriptomics
Revealing fine-scale cellular heterogeneity among spatial context and the functional and
structural foundations of tissue architecture is fundamental within biological research and …
structural foundations of tissue architecture is fundamental within biological research and …
Molecular atlas of the adult mouse brain
Brain maps are essential for integrating information and interpreting the structure-function
relationship of circuits and behavior. We aimed to generate a systematic classification of the …
relationship of circuits and behavior. We aimed to generate a systematic classification of the …
Whole-brain profiling of cells and circuits in mammals by tissue clearing and light-sheet microscopy
Tissue clearing and light-sheet microscopy have a 100-year-plus history, yet these fields
have been combined only recently to facilitate novel experiments and measurements in …
have been combined only recently to facilitate novel experiments and measurements in …