DeepPurpose: a deep learning library for drug–target interaction prediction
Accurate prediction of drug–target interactions (DTI) is crucial for drug discovery. Recently,
deep learning (DL) models for show promising performance for DTI prediction. However …
deep learning (DL) models for show promising performance for DTI prediction. However …
Protein structure prediction: recognition of primary, secondary, and tertiary structural features from amino acid sequence
This review attempts a critical stock-taking of the current state of the science aimed at
predicting structural features of proteins from their amino acid sequences. At the primary …
predicting structural features of proteins from their amino acid sequences. At the primary …
Progress in protein structure prediction
DT Jones - Current Opinion in Structural Biology, 1997 - Elsevier
If protein structure prediction methods are to make any impact on the impending onerous
task of analyzing the large numbers of unknown protein sequences generated by the …
task of analyzing the large numbers of unknown protein sequences generated by the …
Predicting drug-target interactions using Lasso with random forest based on evolutionary information and chemical structure
H Shi, S Liu, J Chen, X Li, Q Ma, B Yu - Genomics, 2019 - Elsevier
The identification of drug-target interactions has great significance for pharmaceutical
scientific research. Since traditional experimental methods identifying drug-target …
scientific research. Since traditional experimental methods identifying drug-target …
DeepPPI: boosting prediction of protein–protein interactions with deep neural networks
The complex language of eukaryotic gene expression remains incompletely understood.
Despite the importance suggested by many proteins variants statistically associated with …
Despite the importance suggested by many proteins variants statistically associated with …
PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence
Sequence-derived structural and physicochemical features have frequently been used in the
development of statistical learning models for predicting proteins and peptides of different …
development of statistical learning models for predicting proteins and peptides of different …
Classification of nuclear receptors based on amino acid composition and dipeptide composition
Nuclear receptors are key transcription factors that regulate crucial gene networks
responsible for cell growth, differentiation, and homeostasis. Nuclear receptors form a …
responsible for cell growth, differentiation, and homeostasis. Nuclear receptors form a …
ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST
Automated prediction of subcellular localization of proteins is an important step in the
functional annotation of genomes. The existing subcellular localization prediction methods …
functional annotation of genomes. The existing subcellular localization prediction methods …
A multimodal deep learning framework for predicting PPI-modulator interactions
Protein–protein interactions (PPIs) are essential for various biological processes and
diseases. However, most existing computational methods for identifying PPI modulators …
diseases. However, most existing computational methods for identifying PPI modulators …
Modality-DTA: multimodality fusion strategy for drug–target affinity prediction
Prediction of the drug–target affinity (DTA) plays an important role in drug discovery. Existing
deep learning methods for DTA prediction typically leverage a single modality, namely …
deep learning methods for DTA prediction typically leverage a single modality, namely …