Advances and opportunities in image analysis of bacterial cells and communities
H Jeckel, K Drescher - FEMS Microbiology Reviews, 2021 - academic.oup.com
The cellular morphology and sub-cellular spatial structure critically influence the function of
microbial cells. Similarly, the spatial arrangement of genotypes and phenotypes in microbial …
microbial cells. Similarly, the spatial arrangement of genotypes and phenotypes in microbial …
Optical coherence tomography in biofilm research: a comprehensive review
Imaging of biofilm systems is a prerequisite for a better understanding of both structure and
its function. The review aims to critically discuss the use of optical coherence tomography …
its function. The review aims to critically discuss the use of optical coherence tomography …
LCU-Net: A novel low-cost U-Net for environmental microorganism image segmentation
In this paper, we propose a novel Low-cost U-Net (LCU-Net) for the Environmental
Microorganism (EM) image segmentation task to assist microbiologists in detecting and …
Microorganism (EM) image segmentation task to assist microbiologists in detecting and …
Quantitative image analysis of microbial communities with BiofilmQ
Biofilms are microbial communities that represent a highly abundant form of microbial life on
Earth. Inside biofilms, phenotypic and genotypic variations occur in three-dimensional space …
Earth. Inside biofilms, phenotypic and genotypic variations occur in three-dimensional space …
[BOK][B] Fundamentals of biofilm research
Z Lewandowski, H Beyenal - 2013 - books.google.com
The six years that have passed since the publication of the first edition have brought
significant advances in both biofilm research and biofilm engineering, which have matured …
significant advances in both biofilm research and biofilm engineering, which have matured …
Green synthesis of silver and iron oxide nanoparticles mediated photothermal effects on Blastocystis hominis
The evolution of parasite resistance to antiparasitic agents has become a serious health
issue indicating a critical and pressing need to develop new therapeutics that can conquer …
issue indicating a critical and pressing need to develop new therapeutics that can conquer …
A state-of-the-art survey for microorganism image segmentation methods and future potential
Microorganisms play a great role in ecosystem, wastewater treatment, monitoring of
environmental changes, and decomposition of waste materials. However, some of them are …
environmental changes, and decomposition of waste materials. However, some of them are …
Investigation of microbial biofilm structure by laser scanning microscopy
TR Neu, JR Lawrence - Productive Biofilms, 2014 - Springer
<? xm-replace_text {Heading}?> Abstract Microbial bioaggregates and biofilms are hydrated
three-dimensional structures of cells and extracellular polymeric substances (EPS) …
three-dimensional structures of cells and extracellular polymeric substances (EPS) …
BiofilmQ, a software tool for quantitative image analysis of microbial biofilm communities
Biofilms are now considered to be the most abundant form of microbial life on Earth, playing
critical roles in biogeochemical cycles, agriculture, and health care. Phenotypic and …
critical roles in biogeochemical cycles, agriculture, and health care. Phenotypic and …
A sensitive thresholding method for confocal laser scanning microscope image stacks of microbial biofilms
TL Luo, MC Eisenberg, MAL Hayashi… - Scientific reports, 2018 - nature.com
Biofilms are surface-attached microbial communities whose architecture can be captured
with confocal microscopy. Manual or automatic thresholding of acquired images is often …
with confocal microscopy. Manual or automatic thresholding of acquired images is often …