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Tools and techniques for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)/COVID-19 detection
SUMMARY The coronavirus disease 2019 (COVID-19) pandemic, caused by severe acute
respiratory disease coronavirus 2 (SARS-CoV-2), has led to millions of confirmed cases and …
respiratory disease coronavirus 2 (SARS-CoV-2), has led to millions of confirmed cases and …
Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities
Various next generation sequencing (NGS) based strategies have been successfully used in
the recent past for tracing origins and understanding the evolution of infectious agents …
the recent past for tracing origins and understanding the evolution of infectious agents …
Detection of a SARS-CoV-2 variant of concern in South Africa
Continued uncontrolled transmission of SARS-CoV-2 in many parts of the world is creating
conditions for substantial evolutionary changes to the virus,. Here we describe a newly …
conditions for substantial evolutionary changes to the virus,. Here we describe a newly …
Emergence and rapid spread of a new severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) lineage with multiple spike mutations in South Africa
Continued uncontrolled transmission of the severe acute respiratory syndrome-related
coronavirus 2 (SARS-CoV-2) in many parts of the world is creating the conditions for …
coronavirus 2 (SARS-CoV-2) in many parts of the world is creating the conditions for …
Escape of SARS-CoV-2 501Y. V2 from neutralization by convalescent plasma
SARS-CoV-2 variants of concern (VOC) have arisen independently at multiple locations,
and may reduce the efficacy of current vaccines that target the spike glycoprotein of SARS …
and may reduce the efficacy of current vaccines that target the spike glycoprotein of SARS …
The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance
Investment in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) sequencing
in Africa over the past year has led to a major increase in the number of sequences that …
in Africa over the past year has led to a major increase in the number of sequences that …
[HTML][HTML] COVID-19 outbreak associated with a SARS-CoV-2 R. 1 lineage variant in a skilled nursing facility after vaccination program—Kentucky, March 2021
AM Cavanaugh - MMWR. Morbidity and Mortality Weekly Report, 2021 - cdc.gov
In a COVID-19 outbreak at a Kentucky SNF involving a newly introduced variant to the
region, unvaccinated residents and health care personnel (HCP) had 3.0 and 4.1 times the …
region, unvaccinated residents and health care personnel (HCP) had 3.0 and 4.1 times the …
Persistent SARS-CoV-2 infection and intra-host evolution in association with advanced HIV infection
While most people effectively clear SARS-CoV-2, there are several reports of prolonged
infection in immunosuppressed individuals. Here we present a case of prolonged infection …
infection in immunosuppressed individuals. Here we present a case of prolonged infection …
COVID-19: impact on the HIV and tuberculosis response, service delivery, and research in South Africa
Q Abdool Karim, C Baxter - Current HIV/AIDS Reports, 2022 - Springer
Abstract Purpose of Review To describe how mitigation measures against COVID-19 have
impacted HIV and TB research in South Africa. Recent Findings South Africa has the highest …
impacted HIV and TB research in South Africa. Recent Findings South Africa has the highest …
[HTML][HTML] ViralFlow: a versatile automated workflow for SARS-CoV-2 genome assembly, lineage assignment, mutations and intrahost variant detection
The COVID-19 pandemic is driven by Severe Acute Respiratory Syndrome coronavirus 2
(SARS-CoV-2) that emerged in 2019 and quickly spread worldwide. Genomic surveillance …
(SARS-CoV-2) that emerged in 2019 and quickly spread worldwide. Genomic surveillance …