Beyond mass spectrometry, the next step in proteomics

W Timp, G Timp - Science Advances, 2020 - science.org
Proteins can be the root cause of a disease, and they can be used to cure it. The need to
identify these critical actors was recognized early (1951) by Sanger; the first biopolymer …

Emerging functions of branched ubiquitin chains

ME French, CF Koehler, T Hunter - Cell discovery, 2021 - nature.com
Ubiquitylation is a critical post-translational modification that controls a wide variety of
processes in eukaryotes. Ubiquitin chains of different topologies are specialized for different …

Cyclic immonium ion of lactyllysine reveals widespread lactylation in the human proteome

N Wan, N Wang, S Yu, H Zhang, S Tang, D Wang… - Nature …, 2022 - nature.com
Lactylation was initially discovered on human histones. Given its nascence, its occurrence
on nonhistone proteins and downstream functional consequences remain elusive. Here we …

Post-translational modifications reshape the antigenic landscape of the MHC I immunopeptidome in tumors

A Kacen, A Javitt, MP Kramer, D Morgenstern… - Nature …, 2023 - nature.com
Post-translational modification (PTM) of antigens provides an additional source of
specificities targeted by immune responses to tumors or pathogens, but identifying antigen …

Detection of phosphorylation post-translational modifications along single peptides with nanopores

IC Nova, J Ritmejeris, H Brinkerhoff, TJR Koenig… - Nature …, 2024 - nature.com
Current methods to detect post-translational modifications of proteins, such as phosphate
groups, cannot measure single molecules or differentiate between closely spaced …

Connexins in cardiovascular and neurovascular health and disease: pharmacological implications

L Leybaert, PD Lampe, S Dhein, BR Kwak… - Pharmacological …, 2017 - Elsevier
Connexins are ubiquitous channel forming proteins that assemble as plasma membrane
hemichannels and as intercellular gap junction channels that directly connect cells. In the …

A perspective on extracellular vesicles proteomics

L Rosa-Fernandes, VB Rocha, VC Carregari… - Frontiers in …, 2017 - frontiersin.org
Increasing attention has been given to secreted extracellular vesicles (EVs) in the past
decades, especially in the portrayal of their molecular cargo and role as messengers in both …

Characterizing endogenous protein complexes with biological mass spectrometry

R Rogawski, M Sharon - Chemical reviews, 2021 - ACS Publications
Biological mass spectrometry (MS) encompasses a range of methods for characterizing
proteins and other biomolecules. MS is uniquely powerful for the structural analysis of …

Edman degradation reveals unequivocal analysis of the disulfide connectivity in peptides and proteins

YY Elsayed, T Kühl, D Imhof - Analytical Chemistry, 2024 - ACS Publications
Disulfide bridges in peptides and proteins play an essential role in maintaining their
conformation, structural integrity, and consequently function. Despite ongoing efforts, it is still …

A review on recent trends in the phosphoproteomics workflow. From sample preparation to data analysis

J Urban - Analytica Chimica Acta, 2022 - Elsevier
Phosphorylation is one of the quickest post-translational modifications that controls
downstream signaling pathways regulating processes like cell proliferation, survival, and …