Genetic load: genomic estimates and applications in non-model animals
Genetic variation, which is generated by mutation, recombination and gene flow, can reduce
the mean fitness of a population, both now and in the future. This 'genetic load'has been …
the mean fitness of a population, both now and in the future. This 'genetic load'has been …
Human papillomavirus genomics: Understanding carcinogenicity
Human papillomavirus (HPV) causes virtually all cervical cancers and many cancers at other
anatomical sites in both men and women. However, only 12 of 448 known HPV types are …
anatomical sites in both men and women. However, only 12 of 448 known HPV types are …
Synonymous mutations in representative yeast genes are mostly strongly non-neutral
Synonymous mutations in protein-coding genes do not alter protein sequences and are thus
generally presumed to be neutral or nearly neutral,,,–. Here, to experimentally verify this …
generally presumed to be neutral or nearly neutral,,,–. Here, to experimentally verify this …
Phylogenies of the 16S rRNA gene and its hypervariable regions lack concordance with core genome phylogenies
HB Hassler, B Probert, C Moore, E Lawson… - Microbiome, 2022 - Springer
Abstract Background The 16S rRNA gene is used extensively in bacterial phylogenetics, in
species delineation, and now widely in microbiome studies. However, the gene suffers from …
species delineation, and now widely in microbiome studies. However, the gene suffers from …
Patterns and evolutionary consequences of pleiotropy
J Zhang - Annual Review of Ecology, Evolution, and Systematics, 2023 - annualreviews.org
Pleiotropy refers to the phenomenon of one gene or one mutation affecting multiple
phenotypic traits. While the concept of pleiotropy is as old as Mendelian genetics, functional …
phenotypic traits. While the concept of pleiotropy is as old as Mendelian genetics, functional …
The impact of genetic diversity on gene essentiality within the Escherichia coli species
Bacteria from the same species can differ widely in their gene content. In Escherichia coli,
the set of genes shared by all strains, known as the core genome, represents about half the …
the set of genes shared by all strains, known as the core genome, represents about half the …
The protein folding problem: the role of theory
The protein folding problem was first articulated as question of how order arose from
disorder in proteins: How did the various native structures of proteins arise from interatomic …
disorder in proteins: How did the various native structures of proteins arise from interatomic …
Causes of evolutionary rate variation among protein sites
It has long been recognized that certain sites within a protein, such as sites in the protein
core or catalytic residues in enzymes, are evolutionarily more conserved than other sites …
core or catalytic residues in enzymes, are evolutionarily more conserved than other sites …
[HTML][HTML] Mammalian circular RNAs result largely from splicing errors
Ubiquitous in eukaryotes, circular RNAs (circRNAs) comprise a large class of mostly non-
coding RNAs produced by back-splicing. Although some circRNAs have demonstrated …
coding RNAs produced by back-splicing. Although some circRNAs have demonstrated …
Weak chemical interactions that drive protein evolution: crowding, sticking, and quinary structure in folding and function
In recent years, better instrumentation and greater computing power have enabled the
imaging of elusive biomolecule dynamics in cells, driving many advances in understanding …
imaging of elusive biomolecule dynamics in cells, driving many advances in understanding …