Networks are one of the most common ways to represent biological systems as complex sets
of binary interactions or relations between different bioentities. In this article, we discuss the …

Understanding complex systems often requires a bottom-up analysis towards a systems
biology approach. The need to investigate a system, not only as individual components but …

The COVID-19 disease caused by the SARS-CoV-2 virus is a health crisis worldwide. While
develo** novel drugs and vaccines is long, repurposing existing drugs against COVID-19 …

Motivation Secondary structure prediction accuracy (SSPA) in the QuanTest benchmark can
be used to measure accuracy of a multiple sequence alignment. SSPA correlates well with …

Certain factors hinder the commercialization of biodesulfurization process, including low
substrate-specificity of the currently reported desulfurizing bacteria and restricted mass …

Protein language models, trained on millions of biologically observed sequences, generate
feature-rich numerical representations of protein sequences. These representations, called …

Key message Global wheat genetic diversity can be used in a unified framework to support
and accelerate hybrid breeding and the development of heterotic groups in wheat. Abstract …

Background: Escherichia coli is a commensal-pathogenic organism, which includes a wide
range of strains. Despite several advanced molecular-genomic technologies for detecting …

Genoty** studies of medically important fungi have addressed elucidation of outbreaks,
nosocomial transmissions, infection routes, and genotype-phenotype correlations, of which …

Microbial terroir is essential to the development of regional fermented food characteristics.
Environmental microbiota participates in the fermentation process and fermentation process …