Multiplex protein imaging in tumour biology

N de Souza, S Zhao, B Bodenmiller - Nature Reviews Cancer, 2024 - nature.com
Tissue imaging has become much more colourful in the past decade. Advances in both
experimental and analytical methods now make it possible to image protein markers in …

[HTML][HTML] Defining and modeling dynamic spatial heterogeneity within tumor microenvironments

B Bareham, M Dibble, M Parsons - Current Opinion in Cell Biology, 2024 - Elsevier
Many solid tumors exhibit significant genetic, cellular, and biophysical heterogeneity which
dynamically evolves during disease progression and after treatment. This constant flux in …

Changes in the tumour microenvironment mark the transition from serous borderline tumour to low‐grade serous carcinoma

R Vallejos, A Zhantuyakova, GL Negri… - The Journal of …, 2024 - Wiley Online Library
Low‐grade serous ovarian carcinoma (LGSC) is a rare and lethal subtype of ovarian cancer.
LGSC is pathologically, biologically, and clinically distinct from the more common high …

Differential effects of macrophage subtype‐specific cytokines on fibroblast proliferation and endothelial cell function in co‐culture system

I Isali, P McClellan, TR Wong, S Hijaz… - … Research Part A, 2025 - Wiley Online Library
Macrophages are involved in several critical activities associated with tissue repair and
regeneration. Current approaches in regenerative medicine are focusing on leveraging the …

Understanding tissue-resident macrophages unlocks the potential for novel combinatorial strategies in breast cancer

M Biswas - Frontiers in Immunology, 2024 - frontiersin.org
Tissue-resident macrophages (TRMs) are an integral part of the innate immune system, but
their biology is not well understood in the context of cancer. Distinctive resident macrophage …

Macrophages: a double-edged sword in female reproduction and disorders

M Park, YS Kim, H Song - Experimental & Molecular Medicine, 2025 - nature.com
Reproduction consists of sequential inflammation-like events, primarily within the
endometrium, from ovulation to embryo implantation, decidualization and delivery. During …

[HTML][HTML] A Primer on Proteomic Characterization of Intercellular Communication in a Virus Microenvironment

JC Kostas, CS Brainard, IM Cristea - Molecular & Cellular Proteomics, 2025 - Elsevier
Intercellular communication is fundamental to multicellular life and a core determinant of
outcomes during viral infection, where the common goals of virus and host for persistence …

[HTML][HTML] Get to know your neighbors with a SNAQ™: A framework for single cell spatial neighborhood analysis in immunohistochemical images

A Silver, A Chakraborty, A Pittu, D Feier, M Anica… - Computational and …, 2024 - Elsevier
Analyzing the local microenvironment of tumor cells can provide significant insights into their
complex interactions with their cellular surroundings, including immune cells. By quantifying …

[HTML][HTML] Reconstructing Spatial Transcriptomics at the Single-cell Resolution with BayesDeep

X Jiang, L Dong, S Wang, Z Wen, M Chen, L Xu, G **ao… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Spatially resolved transcriptomics (SRT) techniques have revolutionized the characterization
of molecular profiles while preserving spatial and morphological context. However, most …

The Microenvironment in DCIS and Its Role in Disease Progression

MR Roozitalab, N Prekete, M Allen, RP Grose… - A Guide to Breast …, 2025 - Springer
Ductal carcinoma in situ (DCIS) accounts for~ 20% of all breast cancer diagnoses but whilst
known to be a precursor of invasive breast cancer (IBC), evidence suggests only one in six …