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A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA
Abstract Late Pliocene and Early Pleistocene epochs 3.6 to 0.8 million years ago had
climates resembling those forecasted under future warming. Palaeoclimatic records show …
climates resembling those forecasted under future warming. Palaeoclimatic records show …
Navigating past oceans: comparing metabarcoding and metagenomics of marine ancient sediment environmental DNA
The condition of ancient marine ecosystems provides context for contemporary biodiversity
changes in human‐impacted oceans. Sequencing sedimentary ancient DNA (sedaDNA) is …
changes in human‐impacted oceans. Sequencing sedimentary ancient DNA (sedaDNA) is …
Construction of a synthetic microbial community based on multiomics linkage technology and analysis of the mechanism of lignocellulose degradation
J Chen, Y Cai, Z Wang, Z Xu, J Li, X Ma, W Zhuang… - Bioresource …, 2023 - Elsevier
The efficient degradation of lignocellulose is a bottleneck for its integrated utilization. This
research performed species analysis and made functional predictions in various ecosystems …
research performed species analysis and made functional predictions in various ecosystems …
Tibetan terrestrial and aquatic ecosystems collapsed with cryosphere loss inferred from sedimentary ancient metagenomics
Glacier and permafrost shrinkage and land-use intensification threaten mountain wildlife
and affect nature conservation strategies. Here, we present paleometagenomic records of …
and affect nature conservation strategies. Here, we present paleometagenomic records of …
metaDMG–a fast and accurate ancient DNA damage toolkit for metagenomic data
Motivation Under favourable conditions DNA molecules can persist for hundreds of
thousands of years. Such genetic remains make up invaluable resources to study past …
thousands of years. Such genetic remains make up invaluable resources to study past …
euka: Robust tetrapodic and arthropodic taxa detection from modern and ancient environmental DNA using pangenomic reference graphs
Ancient environmental DNA (aeDNA) is a crucial source of information for past
environmental reconstruction. However, the computational analysis of aeDNA involves the …
environmental reconstruction. However, the computational analysis of aeDNA involves the …
SedaDNA reveals mid-to late Holocene aquatic plant and algae changes in Luanhaizi Lake on the Tibetan Plateau
X Han, L Feng, N Zhang, S Hu, Z Gu, X Huang… - Palaeogeography …, 2024 - Elsevier
Aquatic plants and algae are the primary producers in lake ecosystems, providing the
organic matter and oxygen necessary for the nutrients and energy of most organisms …
organic matter and oxygen necessary for the nutrients and energy of most organisms …
Enriching barcoding markers in environmental samples utilizing a phylogenetic probe design: Insights from mock communities
Hybridization capture is an emerging method making use of short oligonucleotide baits to
enrich DNA libraries for genomic fragments of specific organisms thus enabling detection of …
enrich DNA libraries for genomic fragments of specific organisms thus enabling detection of …
Food resources of the Khog Gzung site on the Tibetan Plateau revealed by sedimentary ancient DNA
Z Gu, Y Gao, Y Wang, J Yang, J Ran, X Yang… - Science China Earth …, 2023 - Springer
Traditional zooarchaeological and archaeobotanical methods based on morphological
identification of the excavated faunal and floral remains have been broadly used in …
identification of the excavated faunal and floral remains have been broadly used in …
The sedimentary ancient DNA workflow
Sedimentary ancient DNA (sed aDNA) is continuing to revolutionise our understanding of
past biological and geological processes by retrieving and analysing the ancient DNA …
past biological and geological processes by retrieving and analysing the ancient DNA …