Protein sequence analysis using the MPI bioinformatics toolkit
Abstract The MPI Bioinformatics Toolkit (https://toolkit. tuebingen. mpg. de) provides
interactive access to a wide range of the best‐performing bioinformatics tools and …
interactive access to a wide range of the best‐performing bioinformatics tools and …
The PSIPRED protein analysis workbench: 20 years on
DWA Buchan, DT Jones - Nucleic acids research, 2019 - academic.oup.com
The PSIPRED Workbench is a web server offering a range of predictive methods to the
bioscience community for 20 years. Here, we present the work we have completed to update …
bioscience community for 20 years. Here, we present the work we have completed to update …
A completely reimplemented MPI bioinformatics toolkit with a new HHpred server at its core
L Zimmermann, A Stephens, SZ Nam, D Rau… - Journal of molecular …, 2018 - Elsevier
Abstract The MPI Bioinformatics Toolkit (https://toolkit. tuebingen. mpg. de) is a free, one-stop
web service for protein bioinformatic analysis. It currently offers 34 interconnected external …
web service for protein bioinformatic analysis. It currently offers 34 interconnected external …
Systematic discovery of antiphage defense systems in the microbial pangenome
INTRODUCTION Bacteria and archaea are frequently attacked by viruses (phages) and as a
result have developed multiple, sophisticated lines of active defense that can collectively be …
result have developed multiple, sophisticated lines of active defense that can collectively be …
Eukaryotic copper-only superoxide dismutases (SODs): A new class of SOD enzymes and SOD-like protein domains
NG Robinett, RL Peterson, VC Culotta - Journal of Biological Chemistry, 2018 - ASBMB
The copper-containing superoxide dismutases (SODs) represent a large family of enzymes
that participate in the metabolism of reactive oxygen species by disproportionating …
that participate in the metabolism of reactive oxygen species by disproportionating …
Global analysis of protein folding using massively parallel design, synthesis, and testing
GJ Rocklin, TM Chidyausiku, I Goreshnik, A Ford… - Science, 2017 - science.org
Proteins fold into unique native structures stabilized by thousands of weak interactions that
collectively overcome the entropic cost of folding. Although these forces are “encoded” in the …
collectively overcome the entropic cost of folding. Although these forces are “encoded” in the …
The world according to GARP transcription factors
Highlights•GARP family contains genes with very diverse in planta functions.•GARP family
may contain nutrient sensor proteins.•GARP TF could act as pioneer TFs.•GARP TF are thus …
may contain nutrient sensor proteins.•GARP TF could act as pioneer TFs.•GARP TF are thus …
The centrosome is a selective condensate that nucleates microtubules by concentrating tubulin
Centrosomes are non-membrane-bound compartments that nucleate microtubule arrays.
They consist of nanometer-scale centrioles surrounded by a micron-scale, dynamic …
They consist of nanometer-scale centrioles surrounded by a micron-scale, dynamic …
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes
Bacteriophages from the Inoviridae family (inoviruses) are characterized by their unique
morphology, genome content and infection cycle. One of the most striking features of …
morphology, genome content and infection cycle. One of the most striking features of …
Phosphoribosylation of ubiquitin promotes serine ubiquitination and impairs conventional ubiquitination
Conventional ubiquitination involves the ATP-dependent formation of amide bonds between
the ubiquitin C terminus and primary amines in substrate proteins. Recently, SdeA, an …
the ubiquitin C terminus and primary amines in substrate proteins. Recently, SdeA, an …