Culturing the human microbiota and culturomics

JC Lagier, G Dubourg, M Million, F Cadoret… - Nature Reviews …, 2018 - nature.com
The gut microbiota has an important role in the maintenance of human health and in disease
pathogenesis. This importance was realized through the advent of omics technologies and …

Predation in a microbial world: Mechanisms and trade-offs of flagellate foraging

T Kiørboe - Annual Review of Marine Science, 2024 - annualreviews.org
Heterotrophic nanoflagellates are the main consumers of bacteria and picophytoplankton in
the ocean and thus play a key role in ocean biogeochemistry. They are found in all major …

[LLIBRE][B] Processes in microbial ecology

DL Kirchman - 2018 - books.google.com
Microbial ecology is the study of interactions among microbes in natural environments and
their roles in biogeochemical cycles, food web dynamics, and the evolution of life. Microbes …

Selective capture and ingestion of particles by suspension-feeding bivalve molluscs: a review

M Rosa, JE Ward, SE Shumway - Journal of Shellfish Research, 2018 - BioOne
Suspension-feeding bivalve molluscs are foundation species in coastal intertidal systems.
The selective feeding capabilities of these animals can have a large influence on …

Coexisting picoplankton experience different relative grazing pressures across an ocean productivity gradient

MR Landry, MR Stukel, KE Selph… - Proceedings of the …, 2023 - National Acad Sciences
Picophytoplankton populations [Prochlorococcus, Synechococcus (SYN), and
picoeukaryotes] are dominant primary producers in the open ocean and projected to …

Selfish, sharing and scavenging bacteria in the Atlantic Ocean: a biogeographical study of bacterial substrate utilisation

G Reintjes, C Arnosti, B Fuchs, R Amann - The ISME journal, 2019 - academic.oup.com
Identifying the roles played by individual heterotrophic bacteria in the degradation of high
molecular weight (HMW) substrates is critical to understanding the constraints on carbon …

Mammoth grazers on the ocean's minuteness: a review of selective feeding using mucous meshes

KR Conley, F Lombard… - Proceedings of the …, 2018 - royalsocietypublishing.org
Mucous-mesh grazers (pelagic tunicates and thecosome pteropods) are common in oceanic
waters and efficiently capture, consume and repackage particles many orders of magnitude …

Pelagic tunicate grazing on marine microbes revealed by integrative approaches

KR Sutherland, AW Thompson - Limnology and Oceanography, 2022 - Wiley Online Library
Marine microorganisms comprise a large fraction of ocean carbon and are central players in
global biogeochemical cycling. Significant gaps remain, however, in our understanding of …

A comparison of DNA metabarcoding and microscopy methodologies for the study of aquatic microbial eukaryotes

I Santi, P Kasapidis, I Karakassis, P Pitta - Diversity, 2021 - mdpi.com
The procedures and methodologies employed to study microbial eukaryotic plankton have
been thoroughly discussed. Two main schools exist—one insisting on classic microscopy …

Seasonal variation of bacterial diversity along the marine particulate matter continuum

M Mestre, J Höfer, MM Sala, JM Gasol - Frontiers in Microbiology, 2020 - frontiersin.org
Seasonal dynamics of ocean prokaryotic communities in the free-living fraction have been
widely described, but less is known about the seasonality of prokaryotes inhabiting marine …