[HTML][HTML] A pragmatic guide to enrichment strategies for mass spectrometry–based glycoproteomics

NM Riley, CR Bertozzi, SJ Pitteri - Molecular & Cellular Proteomics, 2021 - Elsevier
Glycosylation is a prevalent, yet heterogeneous modification with a broad range of
implications in molecular biology. This heterogeneity precludes enrichment strategies that …

[HTML][HTML] Maturing glycoproteomics technologies provide unique structural insights into the N-glycoproteome and its regulation in health and disease

M Thaysen-Andersen, NH Packer, BL Schulz - Molecular & Cellular …, 2016 - Elsevier
The glycoproteome remains severely understudied because of significant analytical
challenges associated with glycoproteomics, the system-wide analysis of intact …

MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota

X Zhang, Z Ning, J Mayne, JI Moore, J Li, J Butcher… - Microbiome, 2016 - Springer
Background The gut microbiota has been shown to be closely associated with human health
and disease. While next-generation sequencing can be readily used to profile the microbiota …

N-GlycositeAtlas: a database resource for mass spectrometry-based human N-linked glycoprotein and glycosylation site map**

S Sun, Y Hu, M Ao, P Shah, J Chen, W Yang, X Jia… - Clinical proteomics, 2019 - Springer
Background N-linked glycoprotein is a highly interesting class of proteins for clinical and
biological research. The large-scale characterization of N-linked glycoproteins …

Metabolic reprogramming by hexosamine biosynthetic and Golgi N-glycan branching pathways

MC Ryczko, J Pawling, R Chen, AM Abdel Rahman… - Scientific reports, 2016 - nature.com
De novo uridine-diphosphate-N-acetylglucosamine (UDP-GlcNAc) biosynthesis requires
glucose, glutamine, acetyl-CoA and uridine, however GlcNAc salvaged from glycoconjugate …

Recent advances in mass spectrometry (MS)-based glycoproteomics in complex biological samples

Z Chen, J Huang, L Li - TrAC Trends in Analytical Chemistry, 2019 - Elsevier
Protein glycosylation plays a key role in various biological processes and disease-related
pathological progression. Mass spectrometry (MS)-based glycoproteomics is a powerful …

Click synthesis of hydrophilic maltose-functionalized iron oxide magnetic nanoparticles based on dopamine anchors for highly selective enrichment of glycopeptides

C Bi, Y Zhao, L Shen, K Zhang, X He… - … applied materials & …, 2015 - ACS Publications
The development of methods to isolate and enrich low-abundance glycopeptides from
biological samples is crucial to glycoproteomics. Herein, we present an easy and one-step …

Hydrophilic materials in sample pretreatment

F Tang, QW Yu, BF Yuan, YQ Feng - TrAC Trends in Analytical Chemistry, 2017 - Elsevier
Sample pretreatment is a fundamental and essential step in almost all analytical procedures,
especially for the analysis of biological and environmental samples with complex matrix. In …

Bottom-up proteomics (2013–2015): kee** up in the era of systems biology

J Mayne, Z Ning, X Zhang, AE Starr, R Chen… - Analytical …, 2016 - ACS Publications
Over 17,000 papers related to proteomics have been published since our 2011− 2013
review. A subset are true gems reporting amazing applications of proteomics to better …

Characterization of glycopeptides using a stepped higher‐energy C‐trap dissociation approach on a hybrid quadrupole orbitrap

H Yang, C Yang, T Sun - Rapid Communications in Mass …, 2018 - Wiley Online Library
Rationale Accurate characterization of glycopeptides without a prior glycan cleavage could
provide valuable information on site‐specific glycosylation, which is critical to reveal the …