Long-chain polyunsaturated fatty acid biosynthesis in chordates: Insights into the evolution of Fads and Elovl gene repertoire

LFC Castro, DR Tocher, O Monroig - Progress in lipid research, 2016 - Elsevier
Long-chain polyunsaturated fatty acids (LC-PUFA) are major components of complex lipid
molecules and are also involved in numerous critical biological processes. Studies …

The Genome 10K Project: a way forward

KP Koepfli, B Paten… - Annu. Rev. Anim …, 2015 - annualreviews.org
The Genome 10K Project was established in 2009 by a consortium of biologists and
genome scientists determined to facilitate the sequencing and analysis of the complete …

3D genomics across the tree of life reveals condensin II as a determinant of architecture type

C Hoencamp, O Dudchenko, AMO Elbatsh… - Science, 2021 - science.org
We investigated genome folding across the eukaryotic tree of life. We find two types of three-
dimensional (3D) genome architectures at the chromosome scale. Each type appears and …

[HTML][HTML] Deeply conserved synteny resolves early events in vertebrate evolution

O Simakov, F Marlétaz, JX Yue, B O'Connell… - Nature ecology & …, 2020 - nature.com
Although it is widely believed that early vertebrate evolution was shaped by ancient whole-
genome duplications, the number, timing and mechanism of these events remain elusive …

Reconstruction of proto-vertebrate, proto-cyclostome and proto-gnathostome genomes provides new insights into early vertebrate evolution

Y Nakatani, P Shingate, V Ravi, NE Pillai… - Nature …, 2021 - nature.com
Ancient polyploidization events have had a lasting impact on vertebrate genome structure,
organization and function. Some key questions regarding the number of ancient …

The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution

JJ Smith, N Timoshevskaya, C Ye, C Holt, MC Keinath… - Nature …, 2018 - nature.com
The sea lamprey (Petromyzon marinus) serves as a comparative model for reconstructing
vertebrate evolution. To enable more informed analyses, we developed a new assembly of …

The hagfish genome and the evolution of vertebrates

F Marlétaz, N Timoshevskaya, VA Timoshevskiy… - Nature, 2024 - nature.com
As the only surviving lineages of jawless fishes, hagfishes and lampreys provide a crucial
window into early vertebrate evolution,–. Here we investigate the complex history, timing …

Evolution of vertebrates as viewed from the crest

SA Green, M Simoes-Costa, ME Bronner - Nature, 2015 - nature.com
The origin of vertebrates was accompanied by the advent of a novel cell type: the neural
crest. Emerging from the central nervous system, these cells migrate to diverse locations and …

Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification

FM Robertson, MK Gundappa, F Grammes… - Genome biology, 2017 - Springer
Background The functional divergence of duplicate genes (ohnologues) retained from whole
genome duplication (WGD) is thought to promote evolutionary diversification. However …

Diversity as opportunity: insights from 600 million years of AHR evolution

ME Hahn, SI Karchner, RR Merson - Current opinion in toxicology, 2017 - Elsevier
The aryl hydrocarbon receptor (AHR) was for many years of interest only to pharmacologists
and toxicologists. However, this protein has fundamental roles in biology that are being …