X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in …
CD Putnam, M Hammel, GL Hura… - Quarterly reviews of …, 2007 - cambridge.org
Crystallography supplies unparalleled detail on structural information critical for mechanistic
analyses; however, it is restricted to describing low energy conformations of …
analyses; however, it is restricted to describing low energy conformations of …
Coarse-grained models for proteins
V Tozzini - Current opinion in structural biology, 2005 - Elsevier
Coarse-grained models for proteins and biomolecular aggregates have recently enjoyed
renewed interest. Coarse-grained representations combined with enhanced computer …
renewed interest. Coarse-grained representations combined with enhanced computer …
[LIVRE][B] Three-dimensional electron microscopy of macromolecular assemblies: visualization of biological molecules in their native state
J Frank - 2006 - books.google.com
Cryoelectron microscopy of biological molecules is among the hottest growth areas in
biophysics and structural biology at present, and Frank is arguably the most distinguished …
biophysics and structural biology at present, and Frank is arguably the most distinguished …
[LIVRE][B] Coarse-graining of condensed phase and biomolecular systems
GA Voth - 2008 - taylorfrancis.com
Exploring recent developments in the field, Coarse-Graining of Condensed Phase and
Biomolecular Systems examines systematic ways of constructing coarse-grained …
Biomolecular Systems examines systematic ways of constructing coarse-grained …
[HTML][HTML] Usefulness and limitations of normal mode analysis in modeling dynamics of biomolecular complexes
J Ma - Structure, 2005 - cell.com
Various types of large-amplitude molecular deformation are ubiquitously involved in the
functions of biological macromolecules, especially supramolecular complexes. They can be …
functions of biological macromolecules, especially supramolecular complexes. They can be …
iMod: multipurpose normal mode analysis in internal coordinates
Motivation: Dynamic simulations of systems with biologically relevant sizes and time scales
are critical for understanding macromolecular functioning. Coarse-grained representations …
are critical for understanding macromolecular functioning. Coarse-grained representations …
Simulating movement of tRNA into the ribosome during decoding
Decoding is the key step during protein synthesis that enables information transfer from RNA
to protein, a process critical for the survival of all organisms. We have used large-scale …
to protein, a process critical for the survival of all organisms. We have used large-scale …
A structural perspective on protein–protein interactions
Structures of macromolecular complexes are necessary for a mechanistic description of
biochemical and cellular processes. They can be solved by experimental methods, such as …
biochemical and cellular processes. They can be solved by experimental methods, such as …
A global model of tropospheric chlorine chemistry: Organic versus inorganic sources and impact on methane oxidation
Chlorine atoms (Cl) are highly reactive toward hydrocarbons in the Earth's troposphere,
including the greenhouse gas methane (CH4). However, the regional and global CH4 sink …
including the greenhouse gas methane (CH4). However, the regional and global CH4 sink …
Symmetry, form, and shape: guiding principles for robustness in macromolecular machines
Computational studies of large macromolecular assemblages have come a long way during
the past 10 years. With the explosion of computer power and parallel computing, timescales …
the past 10 years. With the explosion of computer power and parallel computing, timescales …