[HTML][HTML] GWAS of reproductive traits in large white pigs on chip and imputed whole-genome sequencing data

X Wang, L Wang, L Shi, P Zhang, Y Li, M Li… - International Journal of …, 2022‏ - mdpi.com
Total number born (TNB), number of stillborn (NSB), and gestation length (GL) are
economically important traits in pig production, and disentangling the molecular …

Genomic inbreeding analysis reveals resilience and genetic diversity in Indian yak populations

K Mahar, A Gurao, A Kumar, LP Singh, M Chitkara… - Gene, 2024‏ - Elsevier
The yak (Bos grunniens), renowned for its adaptability to extreme cold and hypoxic
conditions, stands as a remarkable domestic animal crucial for sustaining livelihoods in …

Genomic measures of inbreeding coefficients and genome-wide scan for runs of homozygosity islands in Iranian river buffalo, Bubalus bubalis

SM Ghoreishifar, H Moradi-Shahrbabak, MH Fallahi… - BMC genetics, 2020‏ - Springer
Background Consecutive homozygous fragments of a genome inherited by offspring from a
common ancestor are known as runs of homozygosity (ROH). ROH can be used to calculate …

[HTML][HTML] Genetic diversity and selection signatures in Jianchang black goats revealed by whole-genome sequencing data

X Sun, J Guo, L Li, T Zhong, L Wang, S Zhan, J Lu… - Animals, 2022‏ - mdpi.com
Simple Summary Jianchang Black goats are one of the indigenous black goat breeds in
China. They are known for their crude feed tolerance but have a low growth rate and small …

Runs of homozygosity in modern chicken revealed by sequence data

R Talebi, T Szmatoła, G Mészáros… - G3: Genes, Genomes …, 2020‏ - academic.oup.com
Runs of homozygosity (ROH) are chromosomal stretches that in a diploid genome appear in
a homozygous state and display identical alleles at multiple contiguous loci. This study …

Genetic diversity and selection signatures within Diannan small-ear pigs revealed by next-generation sequencing

F Wu, H Sun, S Lu, X Gou, D Yan, Z Xu, Z Zhang… - Frontiers in …, 2020‏ - frontiersin.org
Genetic characterization of Chinese indigenous pig breeds is essential to promote scientific
conservation and sustainable development of pigs. Here, we systematically surveyed the …

Whole‐genome SNP markers reveal conservation status, signatures of selection, and introgression in Chinese Laiwu pigs

X Wang, H Zhang, M Huang, J Tang… - Evolutionary …, 2021‏ - Wiley Online Library
Laiwu pigs are a Chinese indigenous breed that is renowned for its exceptionally high
intramuscular fat content (average greater than 6%), providing an excellent genetic resource …

Genomic signatures of inbreeding in a critically endangered parrot, the kākāpō

Y Foster, L Dutoit, S Grosser, N Dussex, BJ Foster… - G3, 2021‏ - academic.oup.com
Events of inbreeding are inevitable in critically endangered species. Reduced population
sizes and unique life-history traits can increase the severity of inbreeding, leading to …

Genome-wide detection of runs of homozygosity in Laiwu pigs revealed by sequencing data

Y Fang, X Hao, Z Xu, H Sun, Q Zhao, R Cao… - Frontiers in …, 2021‏ - frontiersin.org
Laiwu pigs, distinguished by their high intramuscular fat of 7–9%, is an indigenous pig breed
of China, and recent studies also found that Laiwu pigs showed high resistance to Porcine …

Genome-wide assessment of runs of homozygosity and estimates of genomic inbreeding in a chinese composite pig breed

Z Xu, S Mei, J Zhou, Y Zhang, M Qiao, H Sun, Z Li… - Frontiers in …, 2021‏ - frontiersin.org
The primary purpose of the current study was to assess the genetic diversity, runs of
homozygosity (ROH) and ROH islands in a Chinese composite pig and explore hotspot …