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Profiling cell identity and tissue architecture with single-cell and spatial transcriptomics
Single-cell transcriptomics has broadened our understanding of cellular diversity and gene
expression dynamics in healthy and diseased tissues. Recently, spatial transcriptomics has …
expression dynamics in healthy and diseased tissues. Recently, spatial transcriptomics has …
[HTML][HTML] Spatially resolved transcriptomics: a comprehensive review of their technological advances, applications, and challenges
The ability to explore life kingdoms is largely driven by innovations and breakthroughs in
technology, from the invention of the microscope 350 years ago to the recent emergence of …
technology, from the invention of the microscope 350 years ago to the recent emergence of …
STOmicsDB: a comprehensive database for spatial transcriptomics data sharing, analysis and visualization
Recent technological developments in spatial transcriptomics allow researchers to measure
gene expression of cells and their spatial locations at the single-cell level, generating …
gene expression of cells and their spatial locations at the single-cell level, generating …
Custom microfluidic chip design enables cost-effective three-dimensional spatiotemporal transcriptomics with a wide field of view
Spatial transcriptomic techniques offer unprecedented insights into the molecular
organization of complex tissues. However, integrating cost-effectiveness, high throughput, a …
organization of complex tissues. However, integrating cost-effectiveness, high throughput, a …
Cell–cell communication: new insights and clinical implications
J Su, Y Song, Z Zhu, X Huang, J Fan, J Qiao… - Signal Transduction and …, 2024 - nature.com
Multicellular organisms are composed of diverse cell types that must coordinate their
behaviors through communication. Cell–cell communication (CCC) is essential for growth …
behaviors through communication. Cell–cell communication (CCC) is essential for growth …
Microglia-astrocyte crosstalk in the amyloid plaque niche of an Alzheimer's disease mouse model, as revealed by spatial transcriptomics
A Mallach, M Zielonka, V van Lieshout, Y An, JH Khoo… - Cell Reports, 2024 - cell.com
The amyloid plaque niche is a pivotal hallmark of Alzheimer's disease (AD). Here, we
employ two high-resolution spatial transcriptomics (ST) platforms, CosMx and Spatial …
employ two high-resolution spatial transcriptomics (ST) platforms, CosMx and Spatial …
Spatiotemporal omics for biology and medicine
The completion of the Human Genome Project has provided a foundational blueprint for
understanding human life. Nonetheless, understanding the intricate mechanisms through …
understanding human life. Nonetheless, understanding the intricate mechanisms through …
Map** cells through time and space with moscot
D Klein, G Palla, M Lange, M Klein, Z Piran, M Gander… - Nature, 2025 - nature.com
Single-cell genomic technologies enable the multimodal profiling of millions of cells across
temporal and spatial dimensions. However, experimental limitations hinder the …
temporal and spatial dimensions. However, experimental limitations hinder the …
Spatial transcriptomic technologies
Spatial transcriptomic technologies enable measurement of expression levels of genes
systematically throughout tissue space, deepening our understanding of cellular …
systematically throughout tissue space, deepening our understanding of cellular …
Mechanisms of kidney fibrosis and routes towards therapy
N Yamashita, R Kramann - Trends in Endocrinology & Metabolism, 2024 - cell.com
Kidney fibrosis is the final common pathway of virtually all chronic kidney diseases (CKDs)
and is therefore considered to be a promising therapeutic target for these conditions …
and is therefore considered to be a promising therapeutic target for these conditions …