Sexually transmitted infections: challenges ahead
WHO estimated that nearly 1 million people become infected every day with any of four
curable sexually transmitted infections (STIs): chlamydia, gonorrhoea, syphilis, and …
curable sexually transmitted infections (STIs): chlamydia, gonorrhoea, syphilis, and …
Antimicrobial resistance in Neisseria gonorrhoeae in the 21st century: past, evolution, and future
Neisseria gonorrhoeae is evolving into a superbug with resistance to previously and
currently recommended antimicrobials for treatment of gonorrhea, which is a major public …
currently recommended antimicrobials for treatment of gonorrhea, which is a major public …
Antimicrobial resistance in Neisseria gonorrhoeae: Global surveillance and a call for international collaborative action
Antimicrobial resistance in Neisseria gonorrhoeae: Global surveillance and a call for
international collaborative action | PLOS Medicine Skip to main content Advertisement …
international collaborative action | PLOS Medicine Skip to main content Advertisement …
ARIBA: rapid antimicrobial resistance genoty** directly from sequencing reads
Antimicrobial resistance (AMR) is one of the major threats to human and animal health
worldwide, yet few high-throughput tools exist to analyse and predict the resistance of a …
worldwide, yet few high-throughput tools exist to analyse and predict the resistance of a …
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement
BJ Walker, T Abeel, T Shea, M Priest, A Abouelliel… - PloS one, 2014 - journals.plos.org
Advances in modern sequencing technologies allow us to generate sufficient data to
analyze hundreds of bacterial genomes from a single machine in a single day. This potential …
analyze hundreds of bacterial genomes from a single machine in a single day. This potential …
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
The emergence of new sequencing technologies has facilitated the use of bacterial whole
genome alignments for evolutionary studies and outbreak analyses. These datasets, of …
genome alignments for evolutionary studies and outbreak analyses. These datasets, of …
Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens
Whole-genome sequencing (WGS) has been vital for revealing the rapid temporal and
spatial evolution of antimicrobial resistance (AMR) in bacterial pathogens. Some …
spatial evolution of antimicrobial resistance (AMR) in bacterial pathogens. Some …
ClonalFrameML: efficient inference of recombination in whole bacterial genomes
Recombination is an important evolutionary force in bacteria, but it remains challenging to
reconstruct the imports that occurred in the ancestry of a genomic sample. Here we present …
reconstruct the imports that occurred in the ancestry of a genomic sample. Here we present …
World Health Organization Global Gonococcal Antimicrobial Surveillance Program (WHO GASP): review of new data and evidence to inform international …
Antimicrobial resistance (AMR) in Neisseria gonorrhoeae is a serious public health problem,
compromising the management and control of gonorrhoea globally. Resistance in N …
compromising the management and control of gonorrhoea globally. Resistance in N …
Convergent evolution and adaptation of Pseudomonas aeruginosa within patients with cystic fibrosis
Little is known about how within-host evolution compares between genotypically different
strains of the same pathogenic species. We sequenced the whole genomes of 474 …
strains of the same pathogenic species. We sequenced the whole genomes of 474 …