Host and viral zinc-finger proteins in COVID-19

S Esposito, G D'Abrosca, A Antolak… - International journal of …, 2022 - mdpi.com
An unprecedented effort to tackle the ongoing COVID-19 pandemic has characterized the
activity of the global scientific community over the last two years. Hundreds of published …

Targeting allosteric binding site in methylenetetrahydrofolate dehydrogenase 2 (MTHFD2) to identify natural product inhibitors via structure-based computational …

N Rana, D Patel, M Parmar, N Mukherjee, PC Jha… - Scientific Reports, 2023 - nature.com
Cancer has been viewed as one of the deadliest diseases worldwide. Among various types
of cancer, breast cancer is the most common type of cancer in women …

Structural differences in 3C-like protease (Mpro) from SARS-CoV and SARS-CoV-2: molecular insights revealed by molecular dynamics simulations

M Parmar, R Thumar, B Patel, M Athar, PC Jha… - Structural Chemistry, 2023 - Springer
Novel coronavirus SARS-CoV-2 has infected millions of people with thousands of mortalities
globally. The main protease (Mpro) is vital in processing replicase polyproteins. Both the …

[HTML][HTML] Identifying COVID-19 severity-related SARS-CoV-2 mutation using a machine learning method

F Huang, L Chen, W Guo, X Zhou, K Feng, T Huang… - Life, 2022 - mdpi.com
SARS-CoV-2 shows great evolutionary capacity through a high frequency of genomic
variation during transmission. Evolved SARS-CoV-2 often demonstrates resistance to …

Genomic characterization of SARS‐CoV‐2 isolates from patients in Turkey reveals the presence of novel mutations in spike and nsp12 proteins

E Sahin, G Bozdayi, S Yigit, H Muftah… - Journal of medical …, 2021 - Wiley Online Library
Novel mutations have been emerging in the genome of severe acute respiratory syndrome‐
coronavirus 2 (SARS‐CoV‐2); consequently, the evolving of more virulent and treatment …

[HTML][HTML] Role of SARS-CoV-2 mutations in the evolution of the COVID-19 pandemic

P Colson, H Chaudet, J Delerce, P Pontarotti… - Journal of Infection, 2024 - Elsevier
Summary Objectives The SARS-CoV-2 pandemic and large-scale genomic surveillance
provided an exceptional opportunity to analyze mutations that appeared over three years in …

Genetic diversity and evolutionary dynamics of the Omicron variant of SARS-CoV-2 in Morocco

S El Mazouri, A Essabbar, T Aanniz… - … and Global Health, 2024 - Taylor & Francis
Among the numerous variants of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-
CoV-2) that have been reported worldwide, the emergence of the Omicron variant has …

Defective ORF8 dimerization in SARS-CoV-2 delta variant leads to a better adaptive immune response due to abrogation of ORF8-MHC1 interaction

AM Chaudhari, I Singh, M Joshi, A Patel, C Joshi - Molecular Diversity, 2023 - Springer
In India, during the second wave of the COVID-19 pandemic, the breakthrough infections
were mainly caused by the SARS-COV-2 delta variant (B. 1.617. 2). It was reported that …

E156G and Arg158, Phe-157/del mutation in NTD of spike protein in B. 1.617. 2 lineage of SARS-CoV-2 leads to immune evasion through antibody escape

AM Chaudhari, D Kumar, M Joshi, A Patel, C Joshi - BioRxiv, 2021 - biorxiv.org
Emerging variants of SARS-CoV-2 with better immune escape mechanisms and higher
transmissibility remains a persistent threat across the globe. B. 1.617. 2 (Delta) variant was …

[HTML][HTML] Evaluation of immune evasion in SARS-CoV-2 Delta and Omicron variants

AM Chaudhari, M Joshi, D Kumar, A Patel… - Computational and …, 2022 - Elsevier
Emerging SARS-CoV-2 variants with higher transmissibility and immune escape remain a
persistent threat across the globe. This is evident from the recent outbreaks of the Delta (B …