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A novel data transformation and execution strategy for accelerating sparse matrix multiplication on GPUs
SpMM (multiplication of a sparse matrix and a dense matrix) and SDDMM (sampled dense-
dense matrix multiplication) are at the core of many scientific, machine learning, and data …
dense matrix multiplication) are at the core of many scientific, machine learning, and data …
FastZ: accelerating gapped whole genome alignment on GPUs
Recognizing the importance of whole genome alignment (WGA), the National Institutes for
Health maintains LASTZ, a sequential WGA application. As genomic data grows, there is a …
Health maintains LASTZ, a sequential WGA application. As genomic data grows, there is a …
Generalized full sparse tiling of loop chains
CD Krieger - 2013 - search.proquest.com
Computer and computational scientists are tackling increasingly large and complex
problems and are seeking ways of improving the performance of their codes. The key issue …
problems and are seeking ways of improving the performance of their codes. The key issue …
Final Report for Award# DE-SC3956 Separating Algorithm and Implementation via programming Model Injection (SAIMI)
M Strout - 2015 - osti.gov
Programming parallel machines is fraught with difficulties: the obfuscation of algorithms due
to implementation details such as communication and synchronization, the need for …
to implementation details such as communication and synchronization, the need for …