The biogeochemical sulfur cycle of marine sediments

BB Jørgensen, AJ Findlay, A Pellerin - Frontiers in microbiology, 2019 - frontiersin.org
Microbial dissimilatory sulfate reduction to sulfide is a predominant terminal pathway of
organic matter mineralization in the anoxic seabed. Chemical or microbial oxidation of the …

The life sulfuric: microbial ecology of sulfur cycling in marine sediments

K Wasmund, M Mußmann, A Loy - Environmental microbiology …, 2017 - Wiley Online Library
Almost the entire seafloor is covered with sediments that can be more than 10 000 m thick
and represent a vast microbial ecosystem that is a major component of Earth's element and …

Diversity and potential host-interactions of viruses inhabiting deep-sea seamount sediments

M Yu, M Zhang, R Zeng, R Cheng, R Zhang… - Nature …, 2024 - nature.com
Seamounts are globally distributed across the oceans and form one of the major oceanic
biomes. Here, we utilized combined analyses of bulk metagenome and virome to study viral …

An automated Raman-based platform for the sorting of live cells by functional properties

KS Lee, M Palatinszky, FC Pereira, J Nguyen… - Nature …, 2019 - nature.com
Stable-isotope probing is widely used to study the function of microbial taxa in their natural
environment, but sorting of isotopically labelled microbial cells from complex samples for …

Happy together: microbial communities that hook up to swap electrons

DR Lovley - The ISME journal, 2017 - academic.oup.com
The discovery of direct interspecies electron transfer (DIET) and cable bacteria has
demonstrated that microbial cells can exchange electrons over long distances (μm–cm) …

The microbial ecology of estuarine ecosystems

BC Crump, JL Bowen - Annual Review of Marine Science, 2024 - annualreviews.org
Human civilization relies on estuaries, and many estuarine ecosystem services are provided
by microbial communities. These services include high rates of primary production that …

Hydrodynamic disturbance controls microbial community assembly and biogeochemical processes in coastal sediments

YJ Chen, PM Leung, PLM Cook, WW Wong… - The ISME …, 2022 - academic.oup.com
The microbial community composition and biogeochemical dynamics of coastal permeable
(sand) sediments differs from cohesive (mud) sediments. Tide-and wave-driven …

Genomic repertoire of the Woeseiaceae/JTB255, cosmopolitan and abundant core members of microbial communities in marine sediments

M Mußmann, P Pjevac, K Krüger, S Dyksma - The ISME journal, 2017 - academic.oup.com
To date, very little is known about the bacterial core community of marine sediments. Here
we study the environmental distribution, abundance and ecogenomics of the …

Composition and functional diversity of microbial community across a mangrove-inhabited mudflat as revealed by 16S rDNA gene sequences

X Zhang, BX Hu, H Ren, J Zhang - Science of the Total Environment, 2018 - Elsevier
The gradient distribution of microbial communities has been detected in profiles along many
natural environments. In a mangrove seedlings inhabited mudflat, the microbes drive a …

Metagenomic and metatranscriptomic analyses revealed uncultured bacteroidales populations as the dominant proteolytic amino acid degraders in anaerobic …

R Mei, MK Nobu, T Narihiro, WT Liu - Frontiers in microbiology, 2020 - frontiersin.org
Current understanding of amino acid (AA) degraders in anaerobic digesters is mainly based
on cultured species, whereas microorganisms that play important roles in a complex …