Transposable elements in mammalian chromatin organization
Transposable elements (TEs) are mobile DNA elements that comprise almost 50% of
mammalian genomic sequence. TEs are capable of making additional copies of themselves …
mammalian genomic sequence. TEs are capable of making additional copies of themselves …
Sequence, chromatin and evolution of satellite DNA
J Thakur, J Packiaraj, S Henikoff - International journal of molecular …, 2021 - mdpi.com
Satellite DNA consists of abundant tandem repeats that play important roles in cellular
processes, including chromosome segregation, genome organization and chromosome end …
processes, including chromosome segregation, genome organization and chromosome end …
A reference genome for pea provides insight into legume genome evolution
We report the first annotated chromosome-level reference genome assembly for pea, Gregor
Mendel's original genetic model. Phylogenetics and paleogenomics show genomic …
Mendel's original genetic model. Phylogenetics and paleogenomics show genomic …
Global analysis of repetitive DNA from unassembled sequence reads using RepeatExplorer2
RepeatExplorer2 is a novel version of a computational pipeline that uses graph-based
clustering of next-generation sequencing reads for characterization of repetitive DNA in …
clustering of next-generation sequencing reads for characterization of repetitive DNA in …
Chloranthus genome provides insights into the early diversification of angiosperms
Chloranthales remain the last major mesangiosperm lineage without a nuclear genome
assembly. We therefore assemble a high-quality chromosome-level genome of Chloranthus …
assembly. We therefore assemble a high-quality chromosome-level genome of Chloranthus …
A mosaic monoploid reference sequence for the highly complex genome of sugarcane
Sugarcane (Saccharum spp.) is a major crop for sugar and bioenergy production. Its highly
polyploid, aneuploid, heterozygous, and interspecific genome poses major challenges for …
polyploid, aneuploid, heterozygous, and interspecific genome poses major challenges for …
DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome
Transposable elements are viewed as 'selfish genetic elements', yet they contribute to gene
regulation and genome evolution in diverse ways. More than half of the human genome …
regulation and genome evolution in diverse ways. More than half of the human genome …
Analyses of 600+ insect genomes reveal repetitive element dynamics and highlight biodiversity-scale repeat annotation challenges
Repetitive elements (REs) are integral to the composition, structure, and function of
eukaryotic genomes, yet remain understudied in most taxonomic groups. We investigated …
eukaryotic genomes, yet remain understudied in most taxonomic groups. We investigated …
Satellite DNA: an evolving topic
MA Garrido-Ramos - Genes, 2017 - mdpi.com
Satellite DNA represents one of the most fascinating parts of the repetitive fraction of the
eukaryotic genome. Since the discovery of highly repetitive tandem DNA in the 1960s, a lot …
eukaryotic genome. Since the discovery of highly repetitive tandem DNA in the 1960s, a lot …
The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
Sturgeons seem to be frozen in time. The archaic characteristics of this ancient fish lineage
place it in a key phylogenetic position at the base of the~ 30,000 modern teleost fish …
place it in a key phylogenetic position at the base of the~ 30,000 modern teleost fish …