ggPlantmap: an open-source R package for the creation of informative and quantitative ggplot maps derived from plant images

L Jo, K Kajala - Journal of experimental botany, 2024 - academic.oup.com
As plant research generates an ever-growing volume of spatial quantitative data, the need
for decentralized and user-friendly visualization tools to explore large and complex datasets …

Laser Capture Microdissection Transcriptome Reveals Spatiotemporal Tissue Gene Expression Patterns of Medicago truncatula Roots Responding to Rhizobia

E Schnabel, J Thomas, R El-Hawaz… - Molecular Plant …, 2023 - Am Phytopath Society
We report a public resource for examining the spatiotemporal RNA expression of 54,893
Medicago truncatula genes during the first 72 h of response to rhizobial inoculation. Using a …

20 years of the Bio-Analytic Resource for Plant Biology

A Sullivan, MN Lombardo, A Pasha, V Lau… - Nucleic acids …, 2025 - academic.oup.com
Abstract The Bio-Analytic Resource for Plant Biology ('the BAR', at https://bar. utoronto. ca) is
celebrating its 20th year in operation in 2025. The BAR encompasses and provides …

Maize Feature Store: A centralized resource to manage and analyze curated maize multi-omics features for machine learning applications

S Sen, MR Woodhouse, JL Portwood, CM Andorf - Database, 2023 - academic.oup.com
The big-data analysis of complex data associated with maize genomes accelerates genetic
research and improves agronomic traits. As a result, efforts have increased to integrate …

ggPlantmap: an R package for creation of informative and quantitative ggplot maps derived from plant images

L Jo, K Kajala - bioRxiv, 2023 - biorxiv.org
As plant research generates an ever-growing volume of spatial quantitative data, the need
for decentralized and user-friendly visualization tools to explore large and complex datasets …