Clonal hematopoiesis and its impact on the aging osteo-hematopoietic niche

S Winter, KS Götze, JS Hecker, KH Metzeler… - Leukemia, 2024 - nature.com
Clonal hematopoiesis (CH) defines a premalignant state predominantly found in older
persons that increases the risk of develo** hematologic malignancies and age-related …

Human skeletal muscle aging atlas

VR Kedlian, Y Wang, T Liu, X Chen, L Bolt, C Tudor… - Nature aging, 2024 - nature.com
Skeletal muscle aging is a key contributor to age-related frailty and sarcopenia with
substantial implications for global health. Here we profiled 90,902 single cells and 92,259 …

[HTML][HTML] A global view of altered ligand-receptor interactions in bone marrow aging based on single-cell sequencing

W Chen, X Chen, L Yao, J Feng, F Li, Y Shan… - Computational and …, 2024 - Elsevier
Altered cell-cell communication is a hallmark of aging, but its impact on bone marrow aging
remains poorly understood. Based on a common and effective pipeline and single-cell …

Multimodal profiling reveals tissue-directed signatures of human immune cells altered with age

SB Wells, DB Rainbow, M Mark, PA Szabo, C Ergen… - bioRxiv, 2024 - biorxiv.org
The immune system comprises multiple cell lineages and heterogeneous subsets found in
blood and tissues throughout the body. While human immune responses differ between …

Map** the spatial atlas of the human bone tissue integrating spatial and single-cell transcriptomics

W Lin, Y Li, C Qiu, B Zou, Y Gong, X Zhang… - Nucleic Acids …, 2025 - academic.oup.com
Bone is a multifaceted tissue requiring orchestrated interplays of diverse cells within
specialized microenvironments. Although significant progress has been made in …

Rediscovering publicly available single-cell data with the DISCO platform

M Li, KS Ang, B Teo, U Rom, MN Nguyen… - Nucleic Acids …, 2025 - academic.oup.com
Single-cell RNA sequencing (scRNA-seq) has emerged as the key technique for studying
transcriptomics at the single-cell level. In our previous work, we presented the DISCO …

In situ lipidomics of Staphylococcus aureus osteomyelitis using imaging mass spectrometry

CJ Good, CE Butrico, ME Colley, KN Gibson-Corley… - Biorxiv, 2023 - pmc.ncbi.nlm.nih.gov
Osteomyelitis occurs when Staphylococcus aureus invades the bone microenvironment,
resulting in a bone marrow abscess with a spatially defined architecture of cells and …

Targeting Senescent Stem-Like Subpopulations in Philadelphia Chromosome-Like Acute Lymphoblastic Leukemia

YY Ding, JH Sussman, K Madden, JP Loftus, RK Chen… - Blood, 2025 - Elsevier
Philadelphia chromosome-like B-cell acute lymphoblastic leukemia (Ph-like ALL) is driven
by genetic alterations that induce constitutive kinase signaling and is associated with …

Single-cell analysis reveals multi-faceted features of B cell development together with age-associated B cell subpopulations

X Yang, H Tang, C Lan, W He, S Chen, H Zeng, D Liu… - bioRxiv, 2024 - biorxiv.org
The development and maturation of B lymphocytes involve intricate orchestrated processes,
where dedicated gene regulations (GR) take place within specific microenvironments …