Polygenic adaptation: a unifying framework to understand positive selection

N Barghi, J Hermisson, C Schlötterer - Nature Reviews Genetics, 2020 - nature.com
Most adaption processes have a polygenic genetic basis, but even with the recent explosive
growth of genomic data we are still lacking a unified framework describing the dynamics of …

Threespine stickleback: A model system for evolutionary genomics

K Reid, MA Bell, KR Veeramah - Annual review of genomics …, 2021 - annualreviews.org
The repeated adaptation of oceanic threespine sticklebacks to fresh water has made it a
premier organism to study parallel evolution. These small fish have multiple distinct …

fastsimcoal2: demographic inference under complex evolutionary scenarios

L Excoffier, N Marchi, DA Marques… - …, 2021 - academic.oup.com
Motivation fastsimcoal2 extends fastsimcoal, a continuous time coalescent-based genetic
simulation program, by enabling the estimation of demographic parameters under very …

Predicting future from past: The genomic basis of recurrent and rapid stickleback evolution

GA Roberts Kingman, DN Vyas, FC Jones… - Science …, 2021 - science.org
Similar forms often evolve repeatedly in nature, raising long-standing questions about the
underlying mechanisms. Here, we use repeated evolution in stickleback to identify a large …

Complex evolutionary processes maintain an ancient chromosomal inversion

P Nosil, V Soria-Carrasco… - Proceedings of the …, 2023 - National Acad Sciences
Genome re-arrangements such as chromosomal inversions are often involved in adaptation.
As such, they experience natural selection, which can erode genetic variation. Thus …

Correlational selection in the age of genomics

EI Svensson, SJ Arnold, R Bürger, K Csilléry… - Nature ecology & …, 2021 - nature.com
Ecologists and evolutionary biologists are well aware that natural and sexual selection do
not operate on traits in isolation, but instead act on combinations of traits. This long …

Population genomics: advancing understanding of nature

G Luikart, M Kardos, BK Hand, OP Rajora… - Population genomics …, 2019 - Springer
Population genomics is advancing our understanding of evolution, ecology, conservation,
agriculture, forestry, and human health by allowing new and long-standing questions to be …

Climatic similarity and genomic background shape the extent of parallel adaptation in Timema stick insects

S Chaturvedi, Z Gompert, JL Feder… - Nature ecology & …, 2022 - nature.com
Evolution can repeat itself, resulting in parallel adaptations in independent lineages
occupying similar environments. Moreover, parallel evolution sometimes, but not always …

Inference of natural selection from ancient DNA

M Dehasque, MC Ávila-Arcos… - Evolution …, 2020 - academic.oup.com
Evolutionary processes, including selection, can be indirectly inferred based on patterns of
genomic variation among contemporary populations or species. However, this often requires …

Selective sweeps on novel and introgressed variation shape mimicry loci in a butterfly adaptive radiation

M Moest, SM Van Belleghem, JE James, C Salazar… - PLoS …, 2020 - journals.plos.org
Natural selection leaves distinct signatures in the genome that can reveal the targets and
history of adaptive evolution. By analysing high-coverage genome sequence data from 4 …