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The tRNA identity landscape for aminoacylation and beyond
R Giegé, G Eriani - Nucleic Acids Research, 2023 - academic.oup.com
Abstract tRNAs are key partners in ribosome-dependent protein synthesis. This process is
highly dependent on the fidelity of tRNA aminoacylation by aminoacyl-tRNA synthetases …
highly dependent on the fidelity of tRNA aminoacylation by aminoacyl-tRNA synthetases …
Beyond the anticodon: tRNA core modifications and their impact on structure, translation and stress adaptation
MJ Yared, A Marcelot, P Barraud - Genes, 2024 - mdpi.com
Transfer RNAs (tRNAs) are heavily decorated with post-transcriptional chemical
modifications. Approximately 100 different modifications have been identified in tRNAs, and …
modifications. Approximately 100 different modifications have been identified in tRNAs, and …
The Pol III transcriptome: basic features, recurrent patterns, and emerging roles in cancer
Abstract The RNA polymerase III (Pol III) transcriptome is universally comprised of short,
highly structured noncoding RNA (ncRNA). Through RNA–protein interactions, the Pol III …
highly structured noncoding RNA (ncRNA). Through RNA–protein interactions, the Pol III …
tRNA engineering strategies for genetic code expansion
YJ Kim, S Cho, JC Kim, HS Park - Frontiers in Genetics, 2024 - frontiersin.org
The advancement of genetic code expansion (GCE) technology is attributed to the
establishment of specific aminoacyl-tRNA synthetase/tRNA pairs. While earlier …
establishment of specific aminoacyl-tRNA synthetase/tRNA pairs. While earlier …
Advances in methods for tRNA sequencing and quantification
In the past decade tRNA sequencing (tRNA-seq) has attracted considerable attention as an
important tool for the development of novel approaches to quantify highly modified tRNA …
important tool for the development of novel approaches to quantify highly modified tRNA …
Identification of Inosine and 2′-O-Methylinosine Modifications in Yeast Messenger RNA by Liquid Chromatography–Tandem Mass Spectrometry Analysis
The discovery of reversible modifications in messenger RNA (mRNA) opens new research
directions in RNA modification-mediated epigenetic regulation. Yeast is an extensively used …
directions in RNA modification-mediated epigenetic regulation. Yeast is an extensively used …
The RNA polymerase III–RIG-I axis in antiviral immunity and inflammation
Nucleic acid sensors survey subcellular compartments for atypical or mislocalized RNA or
DNA, ultimately triggering innate immune responses. Retinoic acid-inducible gene-I (RIG-I) …
DNA, ultimately triggering innate immune responses. Retinoic acid-inducible gene-I (RIG-I) …
Microplastic exposure is associated with epigenomic effects in the model organism Pimephales promelas (fathead minnow)
Microplastics have evolutionary and ecological impacts across species, affecting organisms'
development, reproduction, and behavior along with contributing to genotoxicity and stress …
development, reproduction, and behavior along with contributing to genotoxicity and stress …
[HTML][HTML] Cell-type-specific expression of tRNAs in the brain regulates cellular homeostasis
Defects in tRNA biogenesis are associated with multiple neurological disorders, yet our
understanding of these diseases has been hampered by an inability to determine tRNA …
understanding of these diseases has been hampered by an inability to determine tRNA …
Functional redundancy in tRNA dihydrouridylation
C Sudol, LM Kilz, V Marchand, Q Thullier… - Nucleic Acids …, 2024 - academic.oup.com
Dihydrouridine (D) is a common modified base found predominantly in transfer RNA (tRNA).
Despite its prevalence, the mechanisms underlying dihydrouridine biosynthesis, particularly …
Despite its prevalence, the mechanisms underlying dihydrouridine biosynthesis, particularly …