A guide to phylogenetic metrics for conservation, community ecology and macroecology
The use of phylogenies in ecology is increasingly common and has broadened our
understanding of biological diversity. Ecological sub‐disciplines, particularly conservation …
understanding of biological diversity. Ecological sub‐disciplines, particularly conservation …
Ecological diversity: measuring the unmeasurable
Diversity is a concept central to ecology, and its measurement is essential for any study of
ecosystem health. But summarizing this complex and multidimensional concept in a single …
ecosystem health. But summarizing this complex and multidimensional concept in a single …
Unifying species diversity, phylogenetic diversity, functional diversity, and related similarity and differentiation measures through Hill numbers
A Chao, CH Chiu, L Jost - Annual review of ecology, evolution …, 2014 - annualreviews.org
Hill numbers or the effective number of species are increasingly used to quantify species
diversity of an assemblage. Hill numbers were recently extended to phylogenetic diversity …
diversity of an assemblage. Hill numbers were recently extended to phylogenetic diversity …
DNA barcodes for ecology, evolution, and conservation
The use of DNA barcodes, which are short gene sequences taken from a standardized
portion of the genome and used to identify species, is entering a new phase of application …
portion of the genome and used to identify species, is entering a new phase of application …
The return of the variance: intraspecific variability in community ecology
Despite being recognized as a promoter of diversity and a condition for local coexistence
decades ago, the importance of intraspecific variance has been neglected over time in …
decades ago, the importance of intraspecific variance has been neglected over time in …
Phylogenetic patterns are not proxies of community assembly mechanisms (they are far better)
The subdiscipline of 'community phylogenetics' is rapidly growing and influencing thinking
regarding community assembly. In particular, phylogenetic dispersion of co‐occurring …
regarding community assembly. In particular, phylogenetic dispersion of co‐occurring …
[LIVRE][B] Functional and phylogenetic ecology in R
NG Swenson - 2014 - Springer
The hypotheses that have been derived to explain the distribution, abundance, dynamics,
and diversity of species are typically tested using data matrices containing the names and …
and diversity of species are typically tested using data matrices containing the names and …
The merging of community ecology and phylogenetic biology
The increasing availability of phylogenetic data, computing power and informatics tools has
facilitated a rapid expansion of studies that apply phylogenetic data and methods to …
facilitated a rapid expansion of studies that apply phylogenetic data and methods to …
A diversity of beta diversities: straightening up a concept gone awry. Part 1. Defining beta diversity as a function of alpha and gamma diversity
H Tuomisto - Ecography, 2010 - Wiley Online Library
The term beta diversity has been used to refer to a wide variety of phenomena. Although all
of these encompass some kind of compositional heterogeneity between places, many are …
of these encompass some kind of compositional heterogeneity between places, many are …
Measuring biodiversity to explain community assembly: a unified approach
S Pavoine, MB Bonsall - Biological Reviews, 2011 - Wiley Online Library
One of the oldest challenges in ecology is to understand the processes that underpin the
composition of communities. Historically, an obvious way in which to describe community …
composition of communities. Historically, an obvious way in which to describe community …