Everything is connected: Graph neural networks

P Veličković - Current Opinion in Structural Biology, 2023 - Elsevier
In many ways, graphs are the main modality of data we receive from nature. This is due to
the fact that most of the patterns we see, both in natural and artificial systems, are elegantly …

[HTML][HTML] Utilizing machine learning on freight transportation and logistics applications: A review

K Tsolaki, T Vafeiadis, A Nizamis, D Ioannidis… - ICT Express, 2023 - Elsevier
This review article explores and locates the current state-of-the-art related to application
areas from freight transportation, supply chain and logistics that focuses on arrival time …

Spatio-temporal graph neural networks for predictive learning in urban computing: A survey

G **, Y Liang, Y Fang, Z Shao, J Huang… - … on Knowledge and …, 2023 - ieeexplore.ieee.org
With recent advances in sensing technologies, a myriad of spatio-temporal data has been
generated and recorded in smart cities. Forecasting the evolution patterns of spatio-temporal …

A generalization of vit/mlp-mixer to graphs

X He, B Hooi, T Laurent, A Perold… - International …, 2023 - proceedings.mlr.press
Abstract Graph Neural Networks (GNNs) have shown great potential in the field of graph
representation learning. Standard GNNs define a local message-passing mechanism which …

Benchmarking graph neural networks

VP Dwivedi, CK Joshi, AT Luu, T Laurent… - Journal of Machine …, 2023 - jmlr.org
In the last few years, graph neural networks (GNNs) have become the standard toolkit for
analyzing and learning from data on graphs. This emerging field has witnessed an extensive …

Trustworthy graph neural networks: Aspects, methods, and trends

H Zhang, B Wu, X Yuan, S Pan, H Tong… - Proceedings of the …, 2024 - ieeexplore.ieee.org
Graph neural networks (GNNs) have emerged as a series of competent graph learning
methods for diverse real-world scenarios, ranging from daily applications such as …

A survey on graph representation learning methods

S Khoshraftar, A An - ACM Transactions on Intelligent Systems and …, 2024 - dl.acm.org
Graph representation learning has been a very active research area in recent years. The
goal of graph representation learning is to generate graph representation vectors that …

A hitchhiker's guide to geometric gnns for 3d atomic systems

A Duval, SV Mathis, CK Joshi, V Schmidt… - arxiv preprint arxiv …, 2023 - arxiv.org
Recent advances in computational modelling of atomic systems, spanning molecules,
proteins, and materials, represent them as geometric graphs with atoms embedded as …

Graph filters for signal processing and machine learning on graphs

E Isufi, F Gama, DI Shuman… - IEEE Transactions on …, 2024 - ieeexplore.ieee.org
Filters are fundamental in extracting information from data. For time series and image data
that reside on Euclidean domains, filters are the crux of many signal processing and …

Expander graph propagation

A Deac, M Lackenby… - Learning on Graphs …, 2022 - proceedings.mlr.press
Deploying graph neural networks (GNNs) on whole-graph classification or regression tasks
is known to be challenging: it often requires computing node features that are mindful of both …