Ribosome biogenesis factors—from names to functions

K Dörner, C Ruggeri, I Zemp, U Kutay - The EMBO journal, 2023‏ - embopress.org
The assembly of ribosomal subunits is a highly orchestrated process that involves a huge
cohort of accessory factors. Most eukaryotic ribosome biogenesis factors were first identified …

The mechanism of eukaryotic translation initiation and principles of its regulation

RJ Jackson, CUT Hellen, TV Pestova - Nature reviews Molecular cell …, 2010‏ - nature.com
Protein synthesis is principally regulated at the initiation stage (rather than during elongation
or termination), allowing rapid, reversible and spatial control of gene expression. Progress …

Structured elements drive extensive circular RNA translation

CK Chen, R Cheng, J Demeter, J Chen… - Molecular cell, 2021‏ - cell.com
The human genome encodes tens of thousands circular RNAs (circRNAs) with mostly
unknown functions. Circular RNAs require internal ribosome entry sites (IRES) if they are to …

The structure of the eukaryotic ribosome at 3.0 Å resolution

A Ben-Shem, N Garreau de Loubresse, S Melnikov… - Science, 2011‏ - science.org
Ribosomes translate genetic information encoded by messenger RNA into proteins. Many
aspects of translation and its regulation are specific to eukaryotes, whose ribosomes are …

Comparative protein structure modeling using MODELLER

B Webb, A Sali - Current protocols in bioinformatics, 2016‏ - Wiley Online Library
Comparative protein structure modeling predicts the three‐dimensional structure of a given
protein sequence (target) based primarily on its alignment to one or more proteins of known …

Comparative protein structure modeling using Modeller

N Eswar, B Webb, MA Marti‐Renom… - Current protocols in …, 2006‏ - Wiley Online Library
Functional characterization of a protein sequence is one of the most frequent problems in
biology. This task is usually facilitated by accurate three‐dimensional (3‐D) structure of the …

One core, two shells: bacterial and eukaryotic ribosomes

S Melnikov, A Ben-Shem… - Nature structural & …, 2012‏ - nature.com
Ribosomes are universally conserved enzymes that carry out protein biosynthesis. Bacterial
and eukaryotic ribosomes, which share an evolutionarily conserved core, are thought to …

Principles of selective ion transport in channels and pumps

E Gouaux, R MacKinnon - science, 2005‏ - science.org
The transport of ions across the membranes of cells and organelles is a prerequisite for
many of life's processes. Transport often involves very precise selectivity for specific ions …

The structure and function of the eukaryotic ribosome

DN Wilson, JHD Cate - Cold Spring Harbor perspectives …, 2012‏ - cshperspectives.cshlp.org
Structures of the bacterial ribosome have provided a framework for understanding universal
mechanisms of protein synthesis. However, the eukaryotic ribosome is much larger than it is …

[ספר][B] Three-dimensional electron microscopy of macromolecular assemblies: visualization of biological molecules in their native state

J Frank - 2006‏ - books.google.com
Cryoelectron microscopy of biological molecules is among the hottest growth areas in
biophysics and structural biology at present, and Frank is arguably the most distinguished …