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[PDF][PDF] New functionality of RNAComposer: an application to shape the axis of miR160 precursor structure
RNAComposer is a fully automated, web-interfaced system for RNA 3D structure prediction,
freely available at http://rnacomposer. cs. put. poznan. pl/and http://rnacomposer. ibch …
freely available at http://rnacomposer. cs. put. poznan. pl/and http://rnacomposer. ibch …
RNApdbee 2.0: multifunctional tool for RNA structure annotation
In the field of RNA structural biology and bioinformatics, an access to correctly annotated
RNA structure is of crucial importance, especially in the secondary and 3D structure …
RNA structure is of crucial importance, especially in the secondary and 3D structure …
Telomerase RNA-based aptamers restore defective myelopoiesis in congenital neutropenic syndromes
E Martínez-Balsalobre, J García-Castillo… - Nature …, 2023 - nature.com
Telomerase RNA (TERC) has a noncanonical function in myelopoiesis binding to a
consensus DNA binding sequence and attracting RNA polymerase II (RNA Pol II), thus …
consensus DNA binding sequence and attracting RNA polymerase II (RNA Pol II), thus …
Frontiers and Challenges of Computing ncRNAs Biogenesis, Function and Modulation
Non-coding RNAs (ncRNAs), generated from nonprotein coding DNA sequences, constitute
98–99% of the human genome. Non-coding RNAs encompass diverse functional classes …
98–99% of the human genome. Non-coding RNAs encompass diverse functional classes …
Computational pipeline for reference-free comparative analysis of RNA 3D structures applied to SARS-CoV-2 UTR models
RNA is a unique biomolecule that is involved in a variety of fundamental biological functions,
all of which depend solely on its structure and dynamics. Since the experimental …
all of which depend solely on its structure and dynamics. Since the experimental …
ONQUADRO: a database of experimentally determined quadruplex structures
ONQUADRO is an advanced database system that supports the study of the structures of
canonical and non-canonical quadruplexes. It combines a relational database that collects …
canonical and non-canonical quadruplexes. It combines a relational database that collects …
Entanglements of structure elements revealed in RNA 3D models
Computational methods to predict RNA 3D structure have more and more practical
applications in molecular biology and medicine. Therefore, it is crucial to intensify efforts to …
applications in molecular biology and medicine. Therefore, it is crucial to intensify efforts to …
RNAComposer and RNA 3D structure prediction for nanotechnology
M Biesiada, K Pachulska-Wieczorek, RW Adamiak… - Methods, 2016 - Elsevier
RNAs adopt specific, stable tertiary architectures to perform their activities. Knowledge of
RNA tertiary structure is fundamental to understand RNA functions beginning with …
RNA tertiary structure is fundamental to understand RNA functions beginning with …
RNAloops: a database of RNA multiloops
Motivation Knowledge of the 3D structure of RNA supports discovering its functions and is
crucial for designing drugs and modern therapeutic solutions. Thus, much attention is …
crucial for designing drugs and modern therapeutic solutions. Thus, much attention is …
New algorithms to represent complex pseudoknotted RNA structures in dot-bracket notation
Motivation Understanding the formation, architecture and roles of pseudoknots in RNA
structures are one of the most difficult challenges in RNA computational biology and …
structures are one of the most difficult challenges in RNA computational biology and …