Fundamental aspects of phase-separated biomolecular condensates

HX Zhou, D Kota, S Qin, R Prasad - Chemical Reviews, 2024 - ACS Publications
Biomolecular condensates, formed through phase separation, are upending our
understanding in much of molecular, cell, and developmental biology. There is an urgent …

Expanding the molecular language of protein liquid–liquid phase separation

S Rekhi, CG Garcia, M Barai, A Rizuan, BS Schuster… - Nature …, 2024 - nature.com
Understanding the relationship between a polypeptide sequence and its phase separation
has important implications for analysing cellular function, treating disease and designing …

When data are lacking: Physics-based inverse design of biopolymers interacting with complex, fluid phases

J Methorst, N van Hilten, A Hoti, KS Stroh… - Journal of Chemical …, 2024 - ACS Publications
Biomolecular research traditionally revolves around comprehending the mechanisms
through which peptides or proteins facilitate specific functions, often driven by their …

Prediction of phase separation propensities of disordered proteins from sequence

S von Bülow, G Tesei, K Lindorff-Larsen - bioRxiv, 2024 - biorxiv.org
Phase separation is thought to be one possible mechanism governing the selective cellular
enrichment of biomolecular constituents for processes such as transcriptional activation …

Predicting heteropolymer interactions: Demixing and hypermixing of disordered protein sequences

K Adachi, K Kawaguchi - Physical Review X, 2024 - APS
Cells contain multiple condensates which spontaneously form due to the heterotypic
interactions between their components. Although the proteins and disordered region …

Sequence complexity and monomer rigidity control the morphologies and aging dynamics of protein aggregates

R Takaki, D Thirumalai - Proceedings of the National Academy of …, 2024 - pnas.org
Understanding the biophysical basis of protein aggregation is important in biology because
of the potential link to several misfolding diseases. Although experiments have shown that …

[HTML][HTML] Balancing thermodynamic stability, dynamics, and kinetics in phase separation of intrinsically disordered proteins

G Zhang, X Chu - The Journal of Chemical Physics, 2024 - pubs.aip.org
Intrinsically disordered proteins (IDPs) are prevalent participants in liquid–liquid phase
separation due to their inherent potential for promoting multivalent binding. Understanding …

Asymmetry in polymer–solvent interactions yields complex thermoresponsive behavior

S Dhamankar, MA Webb - ACS Macro Letters, 2024 - ACS Publications
We introduce a lattice framework that incorporates elements of Flory–Huggins solution
theory and the q-state Potts model to study the phase behavior of polymer solutions and …

Effects of charge asymmetry on the liquid–liquid phase separation of polyampholytes and their condensate properties

Y An, T Gao, T Wang, D Zhang, B Bharti - Soft Matter, 2024 - pubs.rsc.org
Liquid–liquid phase separation (LLPS) is the mechanism underlying the formation of bio-
molecular condensates which are important compartments regulating intra-and extra …

[HTML][HTML] Mesoscale properties of biomolecular condensates emerging from protein chain dynamics

N Galvanetto, MT Ivanović, SA Del Grosso… - Ar**v, 2024 - pmc.ncbi.nlm.nih.gov
Biomolecular condensates form by phase separation of biological polymers. The cellular
functions of the resulting membraneless organelles are closely linked to their physical …