Identifying biases and their potential solutions in human microbiome studies

JT Nearing, AM Comeau, MGI Langille - Microbiome, 2021 - Springer
Advances in DNA sequencing technology have vastly improved the ability of researchers to
explore the microbial inhabitants of the human body. Unfortunately, while these studies have …

The madness of microbiome: attempting to find consensus “best practice” for 16S microbiome studies

J Pollock, L Glendinning, T Wisedchanwet… - Applied and …, 2018 - journals.asm.org
The development and continuous improvement of high-throughput sequencing platforms
have stimulated interest in the study of complex microbial communities. Currently, the most …

Relationship between mucosa-associated gut microbiota and human diseases

N Juge - Biochemical Society Transactions, 2022 - portlandpress.com
The mucus layer covering the gastrointestinal (GI) tract plays a critical role in maintaining gut
homeostasis. In the colon, the inner mucus layer ensures commensal microbes are kept at a …

A step ahead: Exploring the gut microbiota in inpatients with bipolar disorder during a depressive episode

A Painold, S Mörkl, K Kashofer, B Halwachs… - Bipolar …, 2019 - Wiley Online Library
Objectives There is evidence that the gut microbiota plays a major role in the pathogenesis
of diseases of the central nervous system through the gut–brain axis. The aim of the present …

Early‐life gut microbiome and egg allergy

M Fazlollahi, Y Chun, A Grishin, RA Wood, AW Burks… - Allergy, 2018 - Wiley Online Library
Background Gut microbiota may play a role in egg allergy. We sought to examine the
association between early‐life gut microbiota and egg allergy. Methods We studied 141 …

Measuring the gut microbiome in birds: comparison of faecal and cloacal sampling

E Videvall, M Strandh, A Engelbrecht… - Molecular ecology …, 2018 - Wiley Online Library
The gut microbiomes of birds and other animals are increasingly being studied in ecological
and evolutionary contexts. Numerous studies on birds and reptiles have made inferences …

The potential role of the microbiota in prostate cancer pathogenesis and treatment

N Pernigoni, C Guo, L Gallagher, W Yuan… - Nature Reviews …, 2023 - nature.com
The human body hosts a complex and dynamic population of trillions of microorganisms—
the microbiota—which influences the body in homeostasis and disease, including cancer …

Impact of prematurity and nutrition on the develo** gut microbiome and preterm infant growth

A Grier, X Qiu, S Bandyopadhyay, J Holden-Wiltse… - Microbiome, 2017 - Springer
Background Identification of factors that influence the neonatal gut microbiome is urgently
needed to guide clinical practices that support growth of healthy preterm infants. Here, we …

Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors

BT Huynh, V Passet, A Rakotondrasoa, T Diallo… - Gut …, 2020 - Taylor & Francis
ABSTRACT Background: Klebsiella pneumoniae (hereafter, Kp) is a major public health
threat responsible for high levels of multidrug resistant (MDR) human infections. Besides, Kp …