Towards complete and error-free genome assemblies of all vertebrate species

A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti… - Nature, 2021 - nature.com
High-quality and complete reference genome assemblies are fundamental for the
application of genomics to biology, disease, and biodiversity conservation. However, such …

Analysis of the genetic loci of pigment pattern evolution in vertebrates

J Elkin, A Martin, V Courtier‐Orgogozo… - Biological …, 2023 - Wiley Online Library
Vertebrate pigmentation patterns are amongst the best characterised model systems for
studying the genetic basis of adaptive evolution. The wealth of available data on the genetic …

East African cichlid fishes

ME Santos, JF Lopes, CF Kratochwil - EvoDevo, 2023 - Springer
Cichlid fishes are a very diverse and species-rich family of teleost fishes that inhabit lakes
and rivers of India, Africa, and South and Central America. Research has largely focused on …

Chromosome-scale assemblies reveal the structural evolution of African cichlid genomes

MA Conte, R Joshi, EC Moore, SP Nandamuri… - …, 2019 - academic.oup.com
Background African cichlid fishes are well known for their rapid radiations and are a model
system for studying evolutionary processes. Here we compare multiple, high-quality …

Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes

S Ansai, K Mochida, S Fujimoto… - Nature …, 2021 - nature.com
Sexual selection drives rapid phenotypic diversification of mating traits. However, we know
little about the causative genes underlying divergence in sexually selected traits. Here, we …

The cichlid oral and pharyngeal jaws are evolutionarily and genetically coupled

AJ Conith, RC Albertson - Nature Communications, 2021 - nature.com
Evolutionary constraints may significantly bias phenotypic change, while “breaking” from
such constraints can lead to expanded ecological opportunity. Ray-finned fishes have …

[HTML][HTML] Genetics of yellow-orange color variation in a pair of sympatric sulphur butterflies

JJ Hanly, CM Francescutti, LS Loh, OBWH Corning… - Cell Reports, 2023 - cell.com
Continuous color polymorphisms can serve as a tractable model for the genetic and
developmental architecture of traits. Here we investigated continuous color variation in …

Between a rock and a hard polytomy: phylogenomics of the rock-dwelling Mbuna Cichlids of Lake Malaŵi

MD Scherz, P Masonick, A Meyer… - Systematic …, 2022 - academic.oup.com
Whole genome sequences are beginning to revolutionize our understanding of phylogenetic
relationships. Yet, even whole genome sequences can fail to resolve the evolutionary …

Foraging environment determines the genetic architecture and evolutionary potential of trophic morphology in cichlid fishes

KJ Parsons, M Concannon, D Navon, J Wang… - Molecular …, 2016 - Wiley Online Library
Phenotypic plasticity allows organisms to change their phenotype in response to shifts in the
environment. While a central topic in current discussions of evolutionary potential, a …

Ecomorphological divergence and habitat lability in the context of robust patterns of modularity in the cichlid feeding apparatus

AJ Conith, MR Kidd, TD Kocher, RC Albertson - BMC Evolutionary Biology, 2020 - Springer
Background Adaptive radiations are characterized by extreme and/or iterative phenotypic
divergence; however, such variation does not accumulate evenly across an organism …