The many isoforms of human adenylate kinases
C Panayiotou, N Solaroli, A Karlsson - … journal of biochemistry & cell biology, 2014 - Elsevier
Adenine nucleotides are involved in a variety of cellular metabolic processes, including
nucleic acid synthesis and repair, formation of coenzymes, energy transfer, cell and ciliary …
nucleic acid synthesis and repair, formation of coenzymes, energy transfer, cell and ciliary …
Allostery and population shift in drug discovery
Proteins can exist in a large number of conformations around their native states that can be
characterized by an energy landscape. The landscape illustrates individual valleys, which …
characterized by an energy landscape. The landscape illustrates individual valleys, which …
Predicting protein conformational motions using energetic frustration analysis and AlphaFold2
Proteins perform their biological functions through motion. Although high throughput
prediction of the three-dimensional static structures of proteins has proved feasible using …
prediction of the three-dimensional static structures of proteins has proved feasible using …
An all‐atom structure‐based potential for proteins: bridging minimal models with all‐atom empirical forcefields
Protein dynamics take place on many time and length scales. Coarse‐grained structure‐
based \bf(G\overlineo) models utilize the funneled energy landscape theory of protein …
based \bf(G\overlineo) models utilize the funneled energy landscape theory of protein …
[HTML][HTML] Structural diversity of axonemes across mammalian motile cilia
MR Leung, C Sun, J Zeng, JR Anderson, Q Niu… - Nature, 2025 - nature.com
Reproduction, development and homeostasis depend on motile cilia, whose rhythmic
beating is powered by a microtubule-based molecular machine called the axoneme …
beating is powered by a microtubule-based molecular machine called the axoneme …
Allostery can convert binding free energies into concerted domain motions in enzymes
NS Galenkamp, S Zernia, YB Van Oppen… - Nature …, 2024 - nature.com
Enzymatic mechanisms are typically inferred from structural data. However, understanding
enzymes require unravelling the intricate dynamic interplay between dynamics …
enzymes require unravelling the intricate dynamic interplay between dynamics …
Perspective: Nanomotors without moving parts that propel themselves in solution
R Kapral - The Journal of chemical physics, 2013 - pubs.aip.org
Self-propelled nanomotors use chemical energy to produce directed motion. Like many
molecular motors they suffer strong perturbations from the environment in which they move …
molecular motors they suffer strong perturbations from the environment in which they move …
Exploring the conformational transitions of biomolecular systems using a simple two-state anisotropic network model
Biomolecular conformational transitions are essential to biological functions. Most
experimental methods report on the long-lived functional states of biomolecules, but …
experimental methods report on the long-lived functional states of biomolecules, but …
A chemical perspective on allostery
AAST Ribeiro, V Ortiz - Chemical reviews, 2016 - ACS Publications
Much work has been done in the past decade to quantify the phenomenon of allosteric
communication in proteins. Every new study unveils an extra piece of the puzzle in our …
communication in proteins. Every new study unveils an extra piece of the puzzle in our …
Protein functional landscapes, dynamics, allostery: a tortuous path towards a universal theoretical framework
Energy landscape theories have provided a common ground for understanding the protein
folding problem, which once seemed to be overwhelmingly complicated. At the same time …
folding problem, which once seemed to be overwhelmingly complicated. At the same time …