The evolution of non-coding chloroplast DNA and its application in plant systematics

SA Kelchner - Annals of the Missouri Botanical Garden, 2000 - JSTOR
This article reviews several proposed mechanisms of molecular evolution operating in non-
coding regions of the chloroplast genome and argues that awareness and identification of …

[HTML][HTML] A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions

JM Saarela, SV Burke, WP Wysocki, MD Barrett… - PeerJ, 2018 - peerj.com
The systematics of grasses has advanced through applications of plastome phylogenomics,
although studies have been largely limited to subfamilies or other subgroups of Poaceae …

[KÖNYV][B] Plant systematics: an integrated approach

G Singh - 2019 - books.google.com
This fourth edition of Plant Systematics is completely revised and updated. It incorporates
the updated International Code of Nomenclature for Algae, Fungi and Plants (Shenzhen …

Phylogenetic relationships of Triticum and Aegilops and evidence for the origin of the A, B, and D genomes of common wheat (Triticum aestivum)

G Petersen, O Seberg, M Yde, K Berthelsen - Molecular phylogenetics and …, 2006 - Elsevier
Common wheat (Triticum aestivum) has for decades been a textbook example of the
evolution of a major crop species by allopolyploidization. Using a sophisticated extension of …

Complete chloroplast genome sequence of Magnolia kwangsiensis (Magnoliaceae): implication for DNA barcoding and population genetics

DY Kuang, H Wu, YL Wang, LM Gao, SZ Zhang… - Genome, 2011 - cdnsciencepub.com
Here, we report a completely sequenced plastome using Illumina/Solexa sequencing-by-
synthesis (SBS) technology. The plastome of Magnolia kwangsiensis Figlar & Noot. is 159 …

Biosystematics and evolutionary relationships of perennial Triticeae species revealed by genomic analyses

RRC Wang, B Lu - Journal of Systematics and Evolution, 2014 - Wiley Online Library
Understanding the classification and biosystematics of species in Triticeae Dumort., an
economically important tribe in the grass family (Poaceae), is not an easy task, particularly …

Granule-bound starch synthase: structure, function, and phylogenetic utility.

RJ Mason-Gamer, CF Weil… - Molecular biology and …, 1998 - academic.oup.com
Interest in the use of low-copy nuclear genes for phylogenetic analyses of plants has grown
rapidly, because highly repetitive genes such as those commonly used are limited in …

Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling

Y Bouchenak-Khelladi, N Salamin, V Savolainen… - Molecular phylogenetics …, 2008 - Elsevier
In this paper we included a very broad representation of grass family diversity (84% of tribes
and 42% of genera). Phylogenetic inference was based on three plastid DNA regions rbcL …

A Chloroplast Genealogy of Hordeum (Poaceae): Long-Term Persisting Haplotypes, Incomplete Lineage Sorting, Regional Extinction, and the Consequences for …

SS Jakob, FR Blattner - Molecular Biology and Evolution, 2006 - academic.oup.com
To analyze reasons for inconclusive results of earlier chloroplast phylogenies in the grass
genus Hordeum, we established a genealogy of chloroplast haplotypes by sequencing the …

Large retrotransposon derivatives: abundant, conserved but nonautonomous retroelements of barley and related genomes

R Kalendar, CM Vicient, O Peleg… - Genetics, 2004 - academic.oup.com
Retroviruses and LTR retrotransposons comprise two long-terminal repeats (LTRs)
bounding a central domain that encodes the products needed for reverse transcription …