Multivariate phylogenetic comparative methods: evaluations, comparisons, and recommendations

DC Adams, ML Collyer - Systematic biology, 2018 - academic.oup.com
Recent years have seen increased interest in phylogenetic comparative analyses of
multivariate data sets, but to date the varied proposed approaches have not been …

Evidence for phylogenetic signal and correlated evolution in plant–water relation traits

E Ávila‐Lovera, K Winter, GR Goldsmith - New Phytologist, 2023 - Wiley Online Library
Evolutionary relationships are likely to play a significant role in sha** plant physiological
and structural traits observed in contemporary taxa. We review research on phylogenetic …

[LIVRE][B] Modern phylogenetic comparative methods and their application in evolutionary biology: concepts and practice

LZ Garamszegi - 2014 - Springer
Many evolutionary biologists are concerned with the tremendous amount of diversity of
species, and their phenotypes, that we can currently observe in nature, and one of the most …

Rethinking phylogenetic comparative methods

JC Uyeda, R Zenil-Ferguson, MW Pennell - Systematic Biology, 2018 - academic.oup.com
As a result of the process of descent with modification, closely related species tend to be
similar to one another in a myriad different ways. In statistical terms, this means that traits …

The unsolved challenge to phylogenetic correlation tests for categorical characters

WP Maddison, RG FitzJohn - Systematic biology, 2015 - academic.oup.com
When comparative biologists observe that animal species living in caves also tend to have
reduced eyes, they may see such correlation as evidence that the traits are adaptively or …

A primer on phylogenetic generalised least squares

MRE Symonds, SP Blomberg - Modern phylogenetic comparative methods …, 2014 - Springer
Phylogenetic generalised least squares (PGLS) is one of the most commonly employed
phylogenetic comparative methods. The technique, a modification of generalised least …

[LIVRE][B] Cause and correlation in biology: A user's guide to path analysis, structural equations and causal inference with R

B Shipley - 2016 - books.google.com
Many problems in biology require an understanding of the relationships among variables in
a multivariate causal context. Exploring such cause-effect relationships through a series of …

Evolutionary covariation in geometric morphometric data: analyzing integration, modularity, and allometry in a phylogenetic context

CP Klingenberg, J Marugán-Lobón - Systematic biology, 2013 - academic.oup.com
Quantifying integration and modularity of evolutionary changes in morphometric traits is
crucial for understanding how organismal shapes evolve. For this purpose, comparative …

A method for assessing phylogenetic least squares models for shape and other high-dimensional multivariate data

DC Adams - Evolution, 2014 - academic.oup.com
Studies of evolutionary correlations commonly use phylogenetic regression (ie, independent
contrasts and phylogenetic generalized least squares) to assess trait covariation in a …

[PDF][PDF] Cranial integration and modularity: insights into evolution and development from morphometric data

CP Klingenberg - Hystrix, 2013 - iris.unimore.it
Morphological integration and modularity have become central concepts in evolutionary
biology and geometric morphometrics. This review summarizes the most frequently used …