Electrostatic interactions in biological DNA-related systems
AG Cherstvy - Physical Chemistry Chemical Physics, 2011 - pubs.rsc.org
In this perspective article, we focus on recent developments in the theory of charge effects in
biological DNA-related systems. The electrostatic effects on different levels of DNA …
biological DNA-related systems. The electrostatic effects on different levels of DNA …
Visualizing the formation and collapse of DNA toroids
In living organisms, DNA is generally confined into very small volumes. In most viruses,
positively charged multivalent ions assist the condensation of DNA into tightly packed …
positively charged multivalent ions assist the condensation of DNA into tightly packed …
Deciphering the structure of DNA toroids
LR Brewer - Integrative Biology, 2011 - academic.oup.com
Toroids are small donut shaped organizational units within sperm chromatin and viruses
containing DNA and protein. Investigators first characterized the dimensions of toroids …
containing DNA and protein. Investigators first characterized the dimensions of toroids …
Theory and simulations of toroidal and rod-like structures in single-molecule DNA condensation
DNA condensation by multivalent cations plays a crucial role in genome packaging in
viruses and sperm heads, and has been extensively studied using single-molecule …
viruses and sperm heads, and has been extensively studied using single-molecule …
Bundling in semiflexible polymers: A theoretical overview
Supramolecular assemblies of polymers are key modules to sustain the structure of cells
and their function. The main elements of these assemblies are charged semiflexible …
and their function. The main elements of these assemblies are charged semiflexible …
Competition between supercoils and toroids in single molecule DNA condensation
The condensation of free DNA into toroidal structures in the presence of multivalent ions and
polypeptides is well known. Recent single molecule experiments have shown that …
polypeptides is well known. Recent single molecule experiments have shown that …
Complex kinetics of DNA condensation revealed through DNA twist tracing
Toroid formation is an important mechanism for DNA condensation in cells. The length
change during DNA condensation was investigated in previous single-molecule …
change during DNA condensation was investigated in previous single-molecule …
Condensation of circular DNA
EL Starostin - The Journal of Chemical Physics, 2013 - pubs.aip.org
A simple model of a circularly closed double-stranded DNA in a poor solvent is considered
as an example of a semi-flexible polymer with self-attraction. To find the ground states, the …
as an example of a semi-flexible polymer with self-attraction. To find the ground states, the …
Electrostatic interactions in dense DNA phases and protein-DNA complexes
AG Cherstvy - Electrostatics, 2012 - books.google.com
Charges. Many constituents of living cells bear large charges on their surfaces. The list
includes DNA/RNA nucleic acids [1], cellular lipid membranes [2], DNAbinding [3, 4] and …
includes DNA/RNA nucleic acids [1], cellular lipid membranes [2], DNAbinding [3, 4] and …
[PDF][PDF] Do not circulate
A Page - amherst.edu
DNA is an incredibly diverse biomaterial capable of self-assembly into predetermined
nanostructures [1-6]. Combining DNA with proteins for regulatory purposes or to build …
nanostructures [1-6]. Combining DNA with proteins for regulatory purposes or to build …