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State of the art review and report of new tool for drug discovery
Background: There are a great number of tools that can be used in QSAR/QSPR studies;
they are implemented in several programs that are reviewed in this report. The usefulness of …
they are implemented in several programs that are reviewed in this report. The usefulness of …
Graph derivative indices interpretation from the quantum mechanics perspective
This contribution examines the interpretation of the Graph Derivative Indices (GDIs) from the
Quantum Mechanics (QM) perspective and its relation with the Hückel molecular orbital …
Quantum Mechanics (QM) perspective and its relation with the Hückel molecular orbital …
Overproduce and select, or determine optimal molecular descriptor subset via configuration space optimization? Application to the prediction of ecotoxicological …
Predicting the likely biological activity (or property) of compounds is a fundamental and
challenging task in the drug discovery process. Current computational methodologies aim to …
challenging task in the drug discovery process. Current computational methodologies aim to …
Choquet integral-based fuzzy molecular characterizations: when global definitions are computed from the dependency among atom/bond contributions (LOVIs/LOEIs)
CR García-Jacas, L Cabrera-Leyva… - Journal of …, 2018 - Springer
Background Several topological (2D) and geometric (3D) molecular descriptors (MDs) are
calculated from local vertex/edge invariants (LOVIs/LOEIs) by performing an aggregation …
calculated from local vertex/edge invariants (LOVIs/LOEIs) by performing an aggregation …
GOWAWA aggregation operator‐based global molecular characterizations: weighting atom/bond contributions (LOVIs/LOEIs) according to their influence in the …
CR García‐Jacas, L Cabrera‐Leyva… - Molecular …, 2018 - Wiley Online Library
A different perspective to compute global weighted definitions of molecular descriptors from
the contributions of each atom (LOVIs) or covalent bond (LOEIs) within a molecule is …
the contributions of each atom (LOVIs) or covalent bond (LOEIs) within a molecule is …
Exploring the QSAR's predictive truthfulness of the novel N-tuple discrete derivative indices on benchmark datasets
Graph derivative indices (GDIs) have recently been defined over N-atoms (N= 2, 3 and 4)
simultaneously, which are based on the concept of derivatives in discrete mathematics (finite …
simultaneously, which are based on the concept of derivatives in discrete mathematics (finite …
Physico-chemical and structural interpretation of discrete derivative indices on N-tuples atoms
This report examines the interpretation of the Graph Derivative Indices (GDIs) from three
different perspectives (ie, in structural, steric and electronic terms). It is found that the …
different perspectives (ie, in structural, steric and electronic terms). It is found that the …
Is molecular alignment an indispensable requirement in the MIA‐QSAR method?
SJ Barigye, MP Freitas - Journal of Computational Chemistry, 2015 - Wiley Online Library
For a decade, the multivariate image analysis applied to quantitative structure–activity
relationship (MIA‐QSAR) approach has been successfully used in the modeling of several …
relationship (MIA‐QSAR) approach has been successfully used in the modeling of several …
Generalized molecular descriptors derived from event-based discrete derivative
In the present study, a generalized approach for molecular structure characterization is
introduced, based on the relation frequency matrix (F) representation of the molecular graph …
introduced, based on the relation frequency matrix (F) representation of the molecular graph …
Higher-order and mixed discrete derivatives such as a novel graph-theoretical invariant for generating new molecular descriptors
Background: Recently, some authors have defined new molecular descriptors (MDs) based
on the use of the Graph Discrete Derivative, known as Graph Derivative Indices (GDI). This …
on the use of the Graph Discrete Derivative, known as Graph Derivative Indices (GDI). This …