Disease suppressive soils: new insights from the soil microbiome
Soils suppressive to soilborne pathogens have been identified worldwide for almost 60
years and attributed mainly to suppressive or antagonistic microorganisms. Rather than …
years and attributed mainly to suppressive or antagonistic microorganisms. Rather than …
Reintroducing mothur: 10 years later
PD Schloss - Applied and environmental microbiology, 2020 - Am Soc Microbiol
More than 10 years ago, we published the paper describing the mothur software package in
Applied and Environmental Microbiology. Our goal was to create a comprehensive package …
Applied and Environmental Microbiology. Our goal was to create a comprehensive package …
Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …
second largest group of organisms based on global richness estimates, with around 3 …
The ecology of the plastisphere: microbial composition, function, assembly, and network in the freshwater and seawater ecosystems
Microplastics provide a unique habitat for microorganisms, forming the plastisphere. Yet the
ecology of the plastisphere, including the microbial composition, functions, assembly …
ecology of the plastisphere, including the microbial composition, functions, assembly …
From People to Panthera: Natural SARS-CoV-2 Infection in Tigers and Lions at the Bronx Zoo
Despite numerous barriers to transmission, zoonoses are the major cause of emerging
infectious diseases in humans. Among these, severe acute respiratory syndrome (SARS) …
infectious diseases in humans. Among these, severe acute respiratory syndrome (SARS) …
Long-term benefit of Microbiota Transfer Therapy on autism symptoms and gut microbiota
Many studies have reported abnormal gut microbiota in individuals with Autism Spectrum
Disorders (ASD), suggesting a link between gut microbiome and autism-like behaviors …
Disorders (ASD), suggesting a link between gut microbiome and autism-like behaviors …
Deblur rapidly resolves single-nucleotide community sequence patterns
High-throughput sequencing of 16S ribosomal RNA gene amplicons has facilitated
understanding of complex microbial communities, but the inherent noise in PCR and DNA …
understanding of complex microbial communities, but the inherent noise in PCR and DNA …
Two distinct gut microbial pathways contribute to meta-organismal production of phenylacetylglutamine with links to cardiovascular disease
Recent studies show gut microbiota-dependent metabolism of dietary phenylalanine into
phenylacetic acid (PAA) is critical in phenylacetylglutamine (PAGln) production, a metabolite …
phenylacetic acid (PAA) is critical in phenylacetylglutamine (PAGln) production, a metabolite …
Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems
Protists dominate eukaryotic diversity and play key functional roles in all ecosystems,
particularly by catalyzing carbon and nutrient cycling. To date, however, a comparative …
particularly by catalyzing carbon and nutrient cycling. To date, however, a comparative …
Microbiome helper: a custom and streamlined workflow for microbiome research
Sequence-based approaches to study microbiomes, such as 16S rRNA gene sequencing
and metagenomics, are uncovering associations between microbial taxa and a myriad of …
and metagenomics, are uncovering associations between microbial taxa and a myriad of …