Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes

CR Clapier, J Iwasa, BR Cairns… - Nature reviews Molecular …, 2017 - nature.com
Cells utilize diverse ATP-dependent nucleosome-remodelling complexes to carry out
histone sliding, ejection or the incorporation of histone variants, suggesting that different …

Cross-linking mass spectrometry: methods and applications in structural, molecular and systems biology

FJ O'Reilly, J Rappsilber - Nature structural & molecular biology, 2018 - nature.com
Over the past decade, cross-linking mass spectrometry (CLMS) has developed into a robust
and flexible tool that provides medium-resolution structural information. CLMS data provide …

Understanding nucleosome dynamics and their links to gene expression and DNA replication

WKM Lai, BF Pugh - Nature reviews Molecular cell biology, 2017 - nature.com
Advances in genomics technology have provided the means to probe myriad chromatin
interactions at unprecedented spatial and temporal resolution. This has led to a profound …

Mechanical regulation of transcription controls Polycomb-mediated gene silencing during lineage commitment

HQ Le, S Ghatak, CYC Yeung, F Tellkamp… - Nature cell …, 2016 - nature.com
Tissue mechanics drive morphogenesis, but how forces are sensed and transmitted to
control stem cell fate and self-organization remains unclear. We show that a …

Nucleosome structure and function

RK McGinty, S Tan - Chemical reviews, 2015 - ACS Publications
When fully extended, one copy of the three billion base pair human genome reaches a
length of over two meters. Yet, it must be packaged into the nucleus of a cell with an average …

Principles for integrative structural biology studies

MP Rout, A Sali - Cell, 2019 - cell.com
Integrative structure determination is a powerful approach to modeling the structures of
biological systems based on data produced by multiple experimental and theoretical …

Crosslinking and mass spectrometry: an integrated technology to understand the structure and function of molecular machines

A Leitner, M Faini, F Stengel, R Aebersold - Trends in biochemical …, 2016 - cell.com
In recent years, chemical crosslinking of protein complexes and the identification of
crosslinked residues by mass spectrometry (XL-MS; sometimes abbreviated as CX-MS) has …

Structural basis for ATP-dependent chromatin remodelling by the INO80 complex

S Eustermann, K Schall, D Kostrewa, K Lakomek… - Nature, 2018 - nature.com
In the eukaryotic nucleus, DNA is packaged in the form of nucleosomes, each of which
comprises about 147 base pairs of DNA wrapped around a histone protein octamer. The …

[HTML][HTML] The INO80 chromatin remodeling complex promotes thermomorphogenesis by connecting H2A. Z eviction and active transcription in Arabidopsis

M Xue, H Zhang, F Zhao, T Zhao, H Li, D Jiang - Molecular Plant, 2021 - cell.com
Global warming poses a major threat to plant growth and crop production. In some plants,
including Arabidopsis thaliana, elevated temperatures induce a series of morphological and …

Structure and regulation of the human INO80–nucleosome complex

R Ayala, O Willhoft, RJ Aramayo, M Wilkinson… - Nature, 2018 - nature.com
Access to DNA within nucleosomes is required for a variety of processes in cells including
transcription, replication and repair. Consequently, cells encode multiple systems that …