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Incongruence in the phylogenomics era
Genome-scale data and the development of novel statistical phylogenetic approaches have
greatly aided the reconstruction of a broad sketch of the tree of life and resolved many of its …
greatly aided the reconstruction of a broad sketch of the tree of life and resolved many of its …
Phylogenomics and the flowering plant tree of life
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …
technologies continue to provide an impetus for plant phylogenetic study. In the past …
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics
Peatlands are crucial sinks for atmospheric carbon but are critically threatened due to
warming climates. Sphagnum (peat moss) species are keystone members of peatland …
warming climates. Sphagnum (peat moss) species are keystone members of peatland …
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family
Background Deep-branching phylogenetic relationships are often difficult to resolve
because phylogenetic signals are obscured by the long history and complexity of …
because phylogenetic signals are obscured by the long history and complexity of …
The rise of baobab trees in Madagascar
The baobab trees (genus Adansonia) have attracted tremendous attention because of their
striking shape and distinctive relationships with fauna. These spectacular trees have also …
striking shape and distinctive relationships with fauna. These spectacular trees have also …
Genomic insights into zokors' phylogeny and speciation in China
X Liu, S Zhang, Z Cai, Z Kuang, N Wan, Y Wang… - Proceedings of the …, 2022 - pnas.org
The phylogeny and speciation of subterranean zokors in China are unclear, as previous
studies on morphology and limited molecular markers have generated conflicting results …
studies on morphology and limited molecular markers have generated conflicting results …
Phylogenomic discordance is driven by wide-spread introgression and incomplete lineage sorting during rapid species diversification within rattlesnakes (Viperidae …
Abstract.—Phylogenomics allows us to uncover the historical signal of evolutionary
processes through time and estimate phylogenetic networks accounting for these signals …
processes through time and estimate phylogenetic networks accounting for these signals …
Phylogenomics reveal extensive phylogenetic discordance due to incomplete lineage sorting following the rapid radiation of alpine butterflies (Papilionidae …
B He, Y Zhao, C Su, G Lin, Y Wang, L Li… - Systematic …, 2023 - Wiley Online Library
Under rapid radiation, the earliest components of evolutionary divergence are often difficult
to resolve, which were always driven by the characteristics of taxa and the limitations of …
to resolve, which were always driven by the characteristics of taxa and the limitations of …
Plastid phylogenomics and fossil evidence provide new insights into the evolutionary complexity of the 'woody clade'in Saxifragales
L Jia, S Wang, J Hu, K Miao, Y Huang, Y Ji - BMC Plant Biology, 2024 - Springer
Background The “woody clade” in Saxifragales (WCS), encompassing four woody families
(Altingiaceae, Cercidiphyllaceae, Daphniphyllaceae, and Hamamelidaceae), is a …
(Altingiaceae, Cercidiphyllaceae, Daphniphyllaceae, and Hamamelidaceae), is a …
Ancient rapid radiation explains most conflicts among gene trees and well-supported phylogenomic trees of Nostocalean cyanobacteria
Prokaryotic genomes are often considered to be mosaics of genes that do not necessarily
share the same evolutionary history due to widespread horizontal gene transfers (HGTs) …
share the same evolutionary history due to widespread horizontal gene transfers (HGTs) …