Stochastic community assembly: does it matter in microbial ecology?

J Zhou, D Ning - Microbiology and molecular biology reviews, 2017 - Am Soc Microbiol
Understanding the mechanisms controlling community diversity, functions, succession, and
biogeography is a central, but poorly understood, topic in ecology, particularly in microbial …

Microplastics provide new microbial niches in aquatic environments

Y Yang, W Liu, Z Zhang, HP Grossart… - Applied microbiology and …, 2020 - Springer
Microplastics in the biosphere are currently of great environmental concern because of their
potential toxicity for aquatic biota and human health and association with pathogenic …

Low shifts in salinity determined assembly processes and network stability of microeukaryotic plankton communities in a subtropical urban reservoir

Y Mo, F Peng, X Gao, P **ao, R Logares, E Jeppesen… - Microbiome, 2021 - Springer
Background Freshwater salinization may result in significant changes of microbial
community composition and diversity, with implications for ecosystem processes and …

A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming

D Ning, M Yuan, L Wu, Y Zhang, X Guo, X Zhou… - Nature …, 2020 - nature.com
Unraveling the drivers controlling community assembly is a central issue in ecology.
Although it is generally accepted that selection, dispersal, diversification and drift are major …

Balance between community assembly processes mediates species coexistence in agricultural soil microbiomes across eastern China

S Jiao, Y Yang, Y Xu, J Zhang, Y Lu - The ISME Journal, 2020 - academic.oup.com
Revealing the linkages between community assembly and species coexistence, which is
crucial for the understanding of ecosystem diversity and functioning, is a fundamental but …

Abundant fungi adapt to broader environmental gradients than rare fungi in agricultural fields

S Jiao, Y Lu - Global Change Biology, 2020 - Wiley Online Library
Soil communities are intricately linked to ecosystem functioning, and a predictive
understanding of how communities assemble in response to environmental change is of …

A general framework for quantitatively assessing ecological stochasticity

D Ning, Y Deng, JM Tiedje… - Proceedings of the …, 2019 - National Acad Sciences
Understanding the community assembly mechanisms controlling biodiversity patterns is a
central issue in ecology. Although it is generally accepted that both deterministic and …

Metagenomic insights into microbial community structure and metabolism in alpine permafrost on the Tibetan Plateau

L Kang, Y Song, R Mackelprang, D Zhang… - Nature …, 2024 - nature.com
Permafrost, characterized by its frozen soil, serves as a unique habitat for diverse
microorganisms. Understanding these microbial communities is crucial for predicting the …

Diversity within species: interpreting strains in microbiomes

T Van Rossum, P Ferretti, OM Maistrenko… - Nature Reviews …, 2020 - nature.com
Studying within-species variation has traditionally been limited to culturable bacterial
isolates and low-resolution microbial community fingerprinting. Metagenomic sequencing …

[HTML][HTML] From diversity to complexity: Microbial networks in soils

K Guseva, S Darcy, E Simon, LV Alteio… - Soil Biology and …, 2022 - Elsevier
Network analysis has been used for many years in ecological research to analyze
organismal associations, for example in food webs, plant-plant or plant-animal interactions …