Phosphorylation dynamics during early differentiation of human embryonic stem cells

D Van Hoof, J Muñoz, SR Braam, MWH Pinkse… - Cell stem cell, 2009 - cell.com
Pluripotent stem cells self-renew indefinitely and possess characteristic protein-protein
networks that remodel during differentiation. How this occurs is poorly understood. Using …

Sub-chronic toxicity study in rats orally exposed to nanostructured silica

M van der Zande, RJ Vandebriel, MJ Groot… - Particle and fibre …, 2014 - Springer
Abstract Background Synthetic Amorphous Silica (SAS) is commonly used in food and
drugs. Recently, a consumer intake of silica from food was estimated at 9.4 mg/kg bw/day, of …

[HTML][HTML] Using a suite of ontologies for preserving workflow-centric research objects

K Belhajjame, J Zhao, D Garijo, M Gamble… - Journal of Web …, 2015 - Elsevier
Scientific workflows are a popular mechanism for specifying and automating data-driven in
silico experiments. A significant aspect of their value lies in their potential to be reused. Once …

A survey on literature based discovery approaches in biomedical domain

V Gopalakrishnan, K Jha, W **, A Zhang - Journal of biomedical …, 2019 - Elsevier
Abstract Literature Based Discovery (LBD) refers to the problem of inferring new and
interesting knowledge by logically connecting independent fragments of information units …

Micropublications: a semantic model for claims, evidence, arguments and annotations in biomedical communications

T Clark, PN Ciccarese, CA Goble - Journal of biomedical semantics, 2014 - Springer
Background Scientific publications are documentary representations of defeasible
arguments, supported by data and repeatable methods. They are the essential mediating …

Human papillomavirus deregulates the response of a cellular network comprising of chemotactic and proinflammatory genes

R Karim, C Meyers, C Backendorf, K Ludigs, R Offringa… - PloS one, 2011 - journals.plos.org
Despite the presence of intracellular pathogen recognition receptors that allow infected cells
to attract the immune system, undifferentiated keratinocytes (KCs) are the main targets for …

Biological knowledge management: the emerging role of the Semantic Web technologies

E Antezana, M Kuiper, V Mironov - Briefings in bioinformatics, 2009 - academic.oup.com
New knowledge is produced at a continuously increasing speed, and the list of papers,
databases and other knowledge sources that a researcher in the life sciences needs to cope …