Dynamics and function of DNA methylation in plants

H Zhang, Z Lang, JK Zhu - Nature reviews Molecular cell biology, 2018 - nature.com
DNA methylation is a conserved epigenetic modification that is important for gene regulation
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …

Gene retention, fractionation and subgenome differences in polyploid plants

F Cheng, J Wu, X Cai, J Liang, M Freeling, X Wang - Nature plants, 2018 - nature.com
All natural plant species are evolved from ancient polyploids. Polyloidization plays an
important role in plant genome evolution, species divergence and crop domestication. We …

Exploiting induced and natural epigenetic variation for crop improvement

NM Springer, RJ Schmitz - Nature reviews genetics, 2017 - nature.com
Plant breeding has traditionally relied on combining the genetic diversity present within a
species to develop combinations of alleles that provide desired traits. Epigenetic diversity …

Epigenetics for crop improvement in times of global change

I Kakoulidou, EV Avramidou, M Baránek… - Biology, 2021 - mdpi.com
Simple Summary Research on plant epigenetics aims to understand how endogenous,
biotic, and abiotic factors regulate plant development and growth independent of changes in …

Small RNA-mediated DNA methylation during plant reproduction

HT Chow, RA Mosher - The Plant Cell, 2023 - academic.oup.com
Reproductive tissues are a rich source of small RNAs, including several classes of short
interfering (si) RNAs that are restricted to this stage of development. In addition to RNA …

The LEAFY floral regulator displays pioneer transcription factor properties

X Lai, R Blanc-Mathieu, L GrandVuillemin, Y Huang… - Molecular Plant, 2021 - cell.com
Pioneer transcription factors (TFs) are a special category of TFs with the capacity to bind to
closed chromatin regions in which DNA is wrapped around histones and may be highly …

How transposable elements are recognized and epigenetically silenced in plants?

B Liu, M Zhao - Current Opinion in Plant Biology, 2023 - Elsevier
Plant genomes are littered with transposable elements (TEs). Because TEs are potentially
highly mutagenic, host organisms have evolved a set of defense mechanisms to recognize …

Parental DNA methylation states are associated with heterosis in epigenetic hybrids

K Lauss, R Wardenaar, R Oka, MHA van Hulten… - Plant …, 2018 - academic.oup.com
Despite the importance and wide exploitation of heterosis in commercial crop breeding, the
molecular mechanisms behind this phenomenon are not completely understood. Recent …

Paternal DNA methylation is remodeled to maternal levels in rice zygote

Q Liu, X Ma, X Li, X Zhang, S Zhou, L **ong… - Nature …, 2023 - nature.com
Epigenetic reprogramming occurs during reproduction to reset the genome for early
development. In flowering plants, mechanistic details of parental methylation remodeling in …

Recent research on the mechanism of heterosis is important for crop and vegetable breeding systems

R Fujimoto, K Uezono, S Ishikura, K Osabe… - Breeding …, 2018 - jstage.jst.go.jp
Heterosis or hybrid vigor is a phenomenon where hybrid progeny have superior
performance compared to their parental inbred lines. This is important in the use of F 1 …