When phased without water: biophysics of cellular desiccation, from biomolecules to condensates

PS Romero-Perez, Y Dorone, E Flores… - Chemical …, 2023 - ACS Publications
The molecular machinery that enables life has evolved in water, yet many of the organisms
around us are able to survive even extreme desiccation. Especially remarkable are single …

The exon junction complex as a node of post-transcriptional networks

HL Hir, J Saulière, Z Wang - Nature reviews Molecular cell biology, 2016 - nature.com
The exon junction complex (EJC) is deposited onto mRNAs following splicing and adopts a
unique structure, which can both stably bind to mRNAs and function as an anchor for diverse …

Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress

S Filichkin, HD Priest, M Megraw, TC Mockler - Current opinion in plant …, 2015 - Elsevier
Highlights•Alternative splicing results in multiple mRNA isoforms from a single gene.•Cell
type, development, and the environment, modulate splice site selection.•Nonsense …

Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade

TC Boothby, JR Tenlen, FW Smith… - Proceedings of the …, 2015 - National Acad Sciences
Horizontal gene transfer (HGT), or the transfer of genes between species, has been
recognized recently as more pervasive than previously suspected. Here, we report evidence …

Thermopriming triggers splicing memory in Arabidopsis

Y Ling, N Serrano, G Gao, M Atia… - Journal of …, 2018 - academic.oup.com
Abiotic and biotic stresses limit crop productivity. Exposure to a non-lethal stress, referred to
as priming, can allow plants to survive subsequent and otherwise lethal conditions; the …

The multiple functions of the nucleolus in plant development, disease and stress responses

NO Kalinina, S Makarova, A Makhotenko… - Frontiers in plant …, 2018 - frontiersin.org
The nucleolus is the most conspicuous domain in the eukaryotic cell nucleus, whose main
function is ribosomal RNA (rRNA) synthesis and ribosome biogenesis. However, there is …

Abiotic stresses modulate landscape of poplar transcriptome via alternative splicing, differential intron retention, and isoform ratio switching

SA Filichkin, M Hamilton… - Frontiers in plant …, 2018 - frontiersin.org
Abiotic stresses affect plant physiology, development, growth, and alter pre-mRNA splicing.
Western poplar is a model woody tree and a potential bioenergy feedstock. To investigate …

Environmental stresses modulate abundance and timing of alternatively spliced circadian transcripts in Arabidopsis

SA Filichkin, JS Cumbie, P Dharmawardhana… - Molecular plant, 2015 - cell.com
Environmental stresses profoundly altered accumulation of nonsense mRNAs including
intron-retaining (IR) transcripts in Arabidopsis. Temporal patterns of stress-induced IR …

SON is an essential m6A target for hematopoietic stem cell fate

H Luo, M Cortés-López, CL Tam, M ** gametophyte of Marsilea vestita
TC Boothby, RS Zipper, CM van der Weele… - Developmental cell, 2013 - cell.com
The utilization of stored RNA is a driving force in rapid development. Here, we show that
retention and subsequent removal of introns from pre-mRNAs regulate temporal patterns of …